Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AL591926.4-201ENST00000616895 298 ntBASIC4.63□□□□□ -1.67
USB1Q9BQ65 snoZ196.1-201ENST00000625269 89 ntBASIC4.63□□□□□ -1.67
USB1Q9BQ65 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.63□□□□□ -1.67
USB1Q9BQ65 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.63□□□□□ -1.67
USB1Q9BQ65 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
USB1Q9BQ65 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
USB1Q9BQ65 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
USB1Q9BQ65 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.62□□□□□ -1.67
USB1Q9BQ65 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.62□□□□□ -1.67
USB1Q9BQ65 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
USB1Q9BQ65 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
USB1Q9BQ65 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
USB1Q9BQ65 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.62□□□□□ -1.67
USB1Q9BQ65 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
USB1Q9BQ65 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USB1Q9BQ65 AC007656.2-201ENST00000624902 4547 ntBASIC4.62□□□□□ -1.67
USB1Q9BQ65 MIR450A1-201ENST00000362262 91 ntBASIC4.62□□□□□ -1.67
USB1Q9BQ65 RNU6-50P-201ENST00000362356 103 ntBASIC4.62□□□□□ -1.67
USB1Q9BQ65 RNU6-600P-201ENST00000362524 99 ntBASIC4.62□□□□□ -1.67
USB1Q9BQ65 Y_RNA.40-201ENST00000362645 93 ntBASIC4.62□□□□□ -1.67
USB1Q9BQ65 U8.4-201ENST00000363626 134 ntBASIC4.62□□□□□ -1.67
USB1Q9BQ65 SNORD58C-201ENST00000365223 64 ntBASIC4.62□□□□□ -1.67
USB1Q9BQ65 MIR600-201ENST00000385007 98 ntBASIC4.62□□□□□ -1.67
USB1Q9BQ65 Y_RNA.587-201ENST00000391210 103 ntBASIC4.62□□□□□ -1.67
USB1Q9BQ65 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.62□□□□□ -1.67
USB1Q9BQ65 HSPE1P12-201ENST00000412576 301 ntBASIC4.62□□□□□ -1.67
USB1Q9BQ65 VDAC1P3-201ENST00000434069 851 ntBASIC4.62□□□□□ -1.67
USB1Q9BQ65 HMGN2P20-201ENST00000437531 273 ntBASIC4.62□□□□□ -1.67
USB1Q9BQ65 RPS29P10-201ENST00000439197 166 ntBASIC4.62□□□□□ -1.67
USB1Q9BQ65 AC097484.1-201ENST00000471148 389 ntBASIC4.62□□□□□ -1.67
USB1Q9BQ65 AC231760.1-201ENST00000498002 260 ntBASIC4.62□□□□□ -1.67
USB1Q9BQ65 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.62□□□□□ -1.67
USB1Q9BQ65 RNU6-197P-201ENST00000516680 100 ntBASIC4.62□□□□□ -1.67
USB1Q9BQ65 RN7SKP66-201ENST00000516681 231 ntBASIC4.62□□□□□ -1.67
USB1Q9BQ65 AC011602.1-201ENST00000546484 331 ntBASIC4.62□□□□□ -1.67
USB1Q9BQ65 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.62□□□□□ -1.67
USB1Q9BQ65 AC006116.3-201ENST00000592968 361 ntBASIC4.62□□□□□ -1.67
USB1Q9BQ65 AC004832.5-201ENST00000608677 401 ntBASIC4.62□□□□□ -1.67
USB1Q9BQ65 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USB1Q9BQ65 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
USB1Q9BQ65 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
USB1Q9BQ65 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
USB1Q9BQ65 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
USB1Q9BQ65 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.61□□□□□ -1.67
USB1Q9BQ65 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
USB1Q9BQ65 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
USB1Q9BQ65 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
USB1Q9BQ65 OR56B2P-202ENST00000641377 2453 ntBASIC4.61□□□□□ -1.67
USB1Q9BQ65 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
USB1Q9BQ65 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
USB1Q9BQ65 RNU1-94P-201ENST00000362627 173 ntBASIC4.61□□□□□ -1.67
USB1Q9BQ65 RNU6-1164P-201ENST00000364428 107 ntBASIC4.61□□□□□ -1.67
USB1Q9BQ65 RNY4P30-201ENST00000410216 95 ntBASIC4.61□□□□□ -1.67
USB1Q9BQ65 AC073850.1-201ENST00000449243 255 ntBASIC4.61□□□□□ -1.67
USB1Q9BQ65 AL031737.1-201ENST00000450125 223 ntBASIC4.61□□□□□ -1.67
USB1Q9BQ65 AC145146.1-201ENST00000496370 254 ntBASIC4.61□□□□□ -1.67
USB1Q9BQ65 AC078918.1-201ENST00000498515 228 ntBASIC4.61□□□□□ -1.67
USB1Q9BQ65 MIR4646-201ENST00000580775 63 ntBASIC4.61□□□□□ -1.67
USB1Q9BQ65 RPS15AP11-201ENST00000594193 385 ntBASIC4.61□□□□□ -1.67
USB1Q9BQ65 RPL30P11-203ENST00000598995 310 ntBASIC4.61□□□□□ -1.67
USB1Q9BQ65 AP003357.1-201ENST00000604497 148 ntBASIC4.61□□□□□ -1.67
USB1Q9BQ65 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
USB1Q9BQ65 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.61□□□□□ -1.67
USB1Q9BQ65 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
USB1Q9BQ65 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
USB1Q9BQ65 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
USB1Q9BQ65 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.6□□□□□ -1.67
USB1Q9BQ65 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
USB1Q9BQ65 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.6□□□□□ -1.67
USB1Q9BQ65 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.6□□□□□ -1.67
USB1Q9BQ65 RNU6-978P-201ENST00000364371 103 ntBASIC4.6□□□□□ -1.67
USB1Q9BQ65 RNU6-1080P-201ENST00000383982 107 ntBASIC4.6□□□□□ -1.67
USB1Q9BQ65 MIR607-201ENST00000385241 96 ntBASIC4.6□□□□□ -1.67
USB1Q9BQ65 AL590762.2-201ENST00000395798 571 ntBASIC4.6□□□□□ -1.67
USB1Q9BQ65 MIR1182-201ENST00000408363 97 ntBASIC4.6□□□□□ -1.67
USB1Q9BQ65 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.6□□□□□ -1.67
USB1Q9BQ65 RN7SKP284-201ENST00000411002 343 ntBASIC4.6□□□□□ -1.67
USB1Q9BQ65 RPL7AP6-201ENST00000477943 801 ntBASIC4.6□□□□□ -1.67
USB1Q9BQ65 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
USB1Q9BQ65 Y_RNA.677-201ENST00000516401 85 ntBASIC4.6□□□□□ -1.67
USB1Q9BQ65 RNA5SP468-201ENST00000516782 93 ntBASIC4.6□□□□□ -1.67
USB1Q9BQ65 RNA5SP373-201ENST00000517271 95 ntBASIC4.6□□□□□ -1.67
USB1Q9BQ65 RNU6-537P-201ENST00000517277 103 ntBASIC4.6□□□□□ -1.67
USB1Q9BQ65 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.6□□□□□ -1.67
USB1Q9BQ65 RN7SL708P-201ENST00000580952 299 ntBASIC4.6□□□□□ -1.67
USB1Q9BQ65 MIR6719-201ENST00000622428 87 ntBASIC4.6□□□□□ -1.67
USB1Q9BQ65 AC073308.1-201ENST00000623696 305 ntBASIC4.6□□□□□ -1.67
USB1Q9BQ65 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
USB1Q9BQ65 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
USB1Q9BQ65 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
USB1Q9BQ65 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.6□□□□□ -1.67
USB1Q9BQ65 AL136964.1-201ENST00000622038 2990 ntBASIC4.59□□□□□ -1.67
USB1Q9BQ65 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
USB1Q9BQ65 RPL23P2-201ENST00000320371 421 ntBASIC4.59□□□□□ -1.67
USB1Q9BQ65 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
USB1Q9BQ65 SNORD114-7-201ENST00000362520 77 ntBASIC4.59□□□□□ -1.67
USB1Q9BQ65 U3.2-201ENST00000362981 210 ntBASIC4.59□□□□□ -1.67
USB1Q9BQ65 Y_RNA.124-201ENST00000363339 93 ntBASIC4.59□□□□□ -1.67
USB1Q9BQ65 SNORD18B-201ENST00000365659 72 ntBASIC4.59□□□□□ -1.67
USB1Q9BQ65 RNU6-880P-201ENST00000384526 107 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms