Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 U2.15-201ENST00000611544 191 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 U2.16-201ENST00000613119 191 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 U2.12-201ENST00000613778 191 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 U2.20-201ENST00000613956 192 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 U2.9-201ENST00000615427 191 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 U2.11-201ENST00000616345 191 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 U2.2-201ENST00000616535 191 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 U2.3-201ENST00000617785 191 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 U2.19-201ENST00000618602 191 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RNU2-1-201ENST00000618664 191 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 U2.6-201ENST00000619225 191 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 U2.5-201ENST00000619465 191 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 U2.10-201ENST00000620268 191 ntBASIC1.2□□□□□ -2.22
HMCN1Q96RW7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
HMCN1Q96RW7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.140-201ENST00000363474 103 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 MIR215-201ENST00000384858 110 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNA5SP212-201ENST00000391223 107 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RPS3AP26-201ENST00000398259 784 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC092745.2-202ENST00000411880 369 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 VN1R25P-201ENST00000443385 738 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AL591623.2-201ENST00000449978 222 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC006026.2-201ENST00000457376 180 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 MTCYBP18-201ENST00000501056 747 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC027419.1-201ENST00000522976 328 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 PCGEM1.1-201ENST00000613431 131 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AL627230.5-201ENST00000619807 58 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AL137141.1-201ENST00000624622 4836 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 HMGB1P5-201ENST00000255320 642 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC092681.1-201ENST00000297369 291 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNU6-777P-201ENST00000364265 104 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.315-201ENST00000365117 102 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNU6-53P-201ENST00000365367 106 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.375-201ENST00000365625 101 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 MIR548A3-201ENST00000385297 97 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC017079.2-201ENST00000416102 485 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RPL27AP8-201ENST00000424277 446 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 COX6CP13-201ENST00000428703 226 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RPS3AP52-201ENST00000435639 297 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC092170.1-201ENST00000440211 356 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNA5SP76-201ENST00000516277 87 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNU6-917P-201ENST00000516294 104 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 MIR3121-201ENST00000579680 77 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC121334.2-201ENST00000605387 271 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC009229.3-201ENST00000608056 282 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AL109933.3-201ENST00000619095 188 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AL031601.2-202ENST00000622650 282 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNU6-371P-201ENST00000364283 108 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 SNORA25.9-201ENST00000365087 128 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 SNORD115-31-201ENST00000365318 82 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.400-201ENST00000383963 111 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.436-201ENST00000384097 102 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNU6-974P-201ENST00000384099 108 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 SNORD38C-201ENST00000384381 69 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 SNORD90-201ENST00000391145 111 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AL512430.2-201ENST00000406786 339 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 RNU6-1025P-201ENST00000410629 104 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC099548.1-201ENST00000421443 426 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AL353777.1-201ENST00000425552 326 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC092991.1-201ENST00000477176 376 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC022882.1-201ENST00000532142 501 ntBASIC1.19□□□□□ -2.22
HMCN1Q96RW7 AC090616.2-202ENST00000584248 222 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms