Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 AC131238.1-201ENST00000617135 328 ntBASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 SNORA43.4-201ENST00000629559 138 ntBASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 AC012442.3-202ENST00000636742 206 ntBASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 AL672167.1-204ENST00000641875 3017 ntBASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 SALL4P2-201ENST00000423288 2910 ntBASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 AC073346.2-201ENST00000624724 2058 ntBASIC4.57□□□□□ -1.68
CNTNAP3BQ96NU0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 AC010329.5-201ENST00000623497 2174 ntBASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 MIR218-2-201ENST00000385006 110 ntBASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 MIR526A2-201ENST00000390198 65 ntBASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 RNU6-1228P-201ENST00000391014 107 ntBASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 AL355497.1-201ENST00000406262 551 ntBASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 RPL26P27-201ENST00000414397 437 ntBASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 RPL23AP93-201ENST00000440847 484 ntBASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 AC004386.2-201ENST00000441858 148 ntBASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 AL133547.1-201ENST00000448546 220 ntBASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 snoU13.4-201ENST00000458916 104 ntBASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 AC146507.2-201ENST00000460608 476 ntBASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 KC877373.1-201ENST00000479066 408 ntBASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 RNU6-436P-201ENST00000516171 114 ntBASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 AC005255.1-201ENST00000593748 216 ntBASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 AC108738.1-201ENST00000603703 237 ntBASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 AC090132.2-201ENST00000615881 347 ntBASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 MIR6875-201ENST00000617506 72 ntBASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 MIR3653-201ENST00000625572 110 ntBASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 AC140479.6-201ENST00000633535 357 ntBASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 ZFRP1-201ENST00000457579 2970 ntBASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP3BQ96NU0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 RNA5SP119-201ENST00000362715 117 ntBASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 Y_RNA.114-201ENST00000363265 113 ntBASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 U3.9-201ENST00000363823 204 ntBASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 RNU6-873P-201ENST00000363833 107 ntBASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 RNU6-72P-201ENST00000384285 79 ntBASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 Y_RNA.498-201ENST00000384460 102 ntBASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 MIR548A1-201ENST00000385041 97 ntBASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 Y_RNA.617-201ENST00000410920 90 ntBASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 RNU6-592P-201ENST00000411333 103 ntBASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 RPS29P7-201ENST00000439662 171 ntBASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 AC109327.2-201ENST00000448339 378 ntBASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 SNORD108-201ENST00000459332 71 ntBASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 AL591473.1-201ENST00000464297 313 ntBASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 RPL31P13-201ENST00000484151 370 ntBASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 PARP4P3-201ENST00000510265 317 ntBASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 RNU1-103P-201ENST00000516502 125 ntBASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 RPL23AP53-201ENST00000521854 457 ntBASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 MIR5688-201ENST00000580619 83 ntBASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 Z73965.1-201ENST00000623412 2297 ntBASIC4.55□□□□□ -1.68
CNTNAP3BQ96NU0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 Z82209.1-201ENST00000422141 2135 ntBASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 AC004944.1-201ENST00000517807 3059 ntBASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 RNU6-942P-201ENST00000363002 107 ntBASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 RNA5SP513-201ENST00000364648 118 ntBASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 Y_RNA.287-201ENST00000364853 94 ntBASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 RNU6-728P-201ENST00000365375 104 ntBASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 RNU6-597P-201ENST00000365620 102 ntBASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 RNU6-1310P-201ENST00000384153 107 ntBASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 MIRLET7F2-201ENST00000385277 83 ntBASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 AL606845.1-201ENST00000404881 255 ntBASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 RNU4-43P-201ENST00000410628 137 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms