Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 RNU6-927P-201ENST00000516199 100 ntBASIC3.03□□□□□ -1.92
ZNF48Q96MX3 RNU6-911P-201ENST00000516523 104 ntBASIC3.03□□□□□ -1.92
ZNF48Q96MX3 RNU6-570P-201ENST00000517051 105 ntBASIC3.03□□□□□ -1.92
ZNF48Q96MX3 RNU6-111P-201ENST00000517179 105 ntBASIC3.03□□□□□ -1.92
ZNF48Q96MX3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.03□□□□□ -1.92
ZNF48Q96MX3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.03□□□□□ -1.92
ZNF48Q96MX3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.03□□□□□ -1.92
ZNF48Q96MX3 AC012433.1-201ENST00000588916 398 ntBASIC3.03□□□□□ -1.92
ZNF48Q96MX3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.03□□□□□ -1.92
ZNF48Q96MX3 AL137849.1-201ENST00000604767 169 ntBASIC3.03□□□□□ -1.92
ZNF48Q96MX3 AL121917.1-203ENST00000605534 577 ntBASIC3.03□□□□□ -1.92
ZNF48Q96MX3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.03□□□□□ -1.92
ZNF48Q96MX3 AC137590.2-201ENST00000619709 240 ntBASIC3.03□□□□□ -1.92
ZNF48Q96MX3 AC091953.5-201ENST00000622919 233 ntBASIC3.03□□□□□ -1.92
ZNF48Q96MX3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.03□□□□□ -1.92
ZNF48Q96MX3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
ZNF48Q96MX3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
ZNF48Q96MX3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.02□□□□□ -1.93
ZNF48Q96MX3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.02□□□□□ -1.93
ZNF48Q96MX3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF48Q96MX3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.02□□□□□ -1.93
ZNF48Q96MX3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF48Q96MX3 DEFB108F-201ENST00000344638 222 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 RNU1-18P-201ENST00000363062 164 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 Y_RNA.105-201ENST00000363182 111 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 RNU6-933P-201ENST00000384424 107 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 SNORA1.3-201ENST00000384676 136 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 RNU6-33P-201ENST00000384793 107 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 MTCO3P19-201ENST00000415864 321 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF48Q96MX3 RPL27AP8-201ENST00000424277 446 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF48Q96MX3 AP000907.1-201ENST00000428428 510 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 AL592045.1-201ENST00000429867 352 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 AL159987.2-201ENST00000432754 307 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 AC092573.2-201ENST00000434546 243 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 NDUFB4P6-201ENST00000436819 366 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF48Q96MX3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF48Q96MX3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF48Q96MX3 RPS27P29-201ENST00000463110 252 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 AC074250.1-201ENST00000511117 192 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 RNU6-406P-201ENST00000516470 107 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 RN7SKP282-201ENST00000516824 299 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 RNU6-1315P-201ENST00000517187 99 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 AC034114.1-201ENST00000520293 285 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF48Q96MX3 AC022080.3-201ENST00000544433 482 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 RRN3P3-201ENST00000549207 578 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.02□□□□□ -1.93
ZNF48Q96MX3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF48Q96MX3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF48Q96MX3 RPS29P30-201ENST00000600975 111 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 SNORA62.6-201ENST00000606322 83 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 AL512643.1-201ENST00000635735 524 ntBASIC3.02□□□□□ -1.93
ZNF48Q96MX3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF48Q96MX3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
ZNF48Q96MX3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.02□□□□□ -1.93
ZNF48Q96MX3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF48Q96MX3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
ZNF48Q96MX3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF48Q96MX3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
ZNF48Q96MX3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
ZNF48Q96MX3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
ZNF48Q96MX3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
ZNF48Q96MX3 ZNF299P-201ENST00000406845 1804 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 UBE2L2-201ENST00000254302 429 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ZNF48Q96MX3 Y_RNA.20-201ENST00000362479 113 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 RNU6-1317P-201ENST00000364582 104 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 RNU6-611P-201ENST00000384276 104 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 Y_RNA.471-201ENST00000384312 102 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
ZNF48Q96MX3 RNU6-121P-201ENST00000410525 99 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 RNU6-130P-201ENST00000411112 103 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 RPL21P38-201ENST00000418090 167 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF48Q96MX3 AC092423.1-201ENST00000430165 186 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 MTND5P15-201ENST00000434246 349 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.01□□□□□ -1.93
ZNF48Q96MX3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF48Q96MX3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF48Q96MX3 RPEP5-201ENST00000441137 268 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 AL031183.1-201ENST00000457667 207 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 HMGB1P35-201ENST00000503360 598 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 RNA5SP208-201ENST00000516156 78 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 MIR892C-201ENST00000516410 77 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 RNA5SP471-201ENST00000516971 106 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 MIR5696-201ENST00000578474 85 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 MIR3200-201ENST00000580767 85 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 MIR7975-201ENST00000619350 68 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF48Q96MX3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.01□□□□□ -1.93
ZNF48Q96MX3 CEP170P1-201ENST00000502249 4587 ntBASIC3.01□□□□□ -1.93
ZNF48Q96MX3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
ZNF48Q96MX3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
ZNF48Q96MX3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms