Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 FAM35BP-202ENST00000497389 3337 ntBASIC4.47□□□□□ -1.69
IFT43Q96FT9 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.47□□□□□ -1.69
IFT43Q96FT9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.46□□□□□ -1.69
IFT43Q96FT9 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
IFT43Q96FT9 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.46□□□□□ -1.7
IFT43Q96FT9 USP8P1-201ENST00000494673 3183 ntBASIC4.46□□□□□ -1.7
IFT43Q96FT9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.46□□□□□ -1.7
IFT43Q96FT9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.46□□□□□ -1.7
IFT43Q96FT9 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
IFT43Q96FT9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
IFT43Q96FT9 RNA5SP197-201ENST00000363357 119 ntBASIC4.46□□□□□ -1.7
IFT43Q96FT9 RNA5SP515-201ENST00000364570 118 ntBASIC4.46□□□□□ -1.7
IFT43Q96FT9 Y_RNA.262-201ENST00000364641 102 ntBASIC4.46□□□□□ -1.7
IFT43Q96FT9 MIR3065-201ENST00000390137 79 ntBASIC4.46□□□□□ -1.7
IFT43Q96FT9 SNORA74C-2-201ENST00000411179 201 ntBASIC4.46□□□□□ -1.7
IFT43Q96FT9 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.46□□□□□ -1.7
IFT43Q96FT9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.46□□□□□ -1.7
IFT43Q96FT9 UQCRBP2-201ENST00000447827 297 ntBASIC4.46□□□□□ -1.7
IFT43Q96FT9 MRPS10P1-201ENST00000448483 130 ntBASIC4.46□□□□□ -1.7
IFT43Q96FT9 RN7SL98P-201ENST00000462271 300 ntBASIC4.46□□□□□ -1.7
IFT43Q96FT9 RPS27AP10-201ENST00000496103 208 ntBASIC4.46□□□□□ -1.7
IFT43Q96FT9 AC020593.1-201ENST00000507399 299 ntBASIC4.46□□□□□ -1.7
IFT43Q96FT9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.46□□□□□ -1.7
IFT43Q96FT9 RNA5SP468-201ENST00000516782 93 ntBASIC4.46□□□□□ -1.7
IFT43Q96FT9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.46□□□□□ -1.7
IFT43Q96FT9 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.46□□□□□ -1.7
IFT43Q96FT9 NACAP3-201ENST00000552100 481 ntBASIC4.46□□□□□ -1.7
IFT43Q96FT9 MIR3939-201ENST00000582614 106 ntBASIC4.46□□□□□ -1.7
IFT43Q96FT9 MIR3138-201ENST00000585238 82 ntBASIC4.46□□□□□ -1.7
IFT43Q96FT9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.46□□□□□ -1.7
IFT43Q96FT9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
IFT43Q96FT9 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
IFT43Q96FT9 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
IFT43Q96FT9 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
IFT43Q96FT9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.46□□□□□ -1.7
IFT43Q96FT9 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
IFT43Q96FT9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
IFT43Q96FT9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
IFT43Q96FT9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
IFT43Q96FT9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
IFT43Q96FT9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
IFT43Q96FT9 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
IFT43Q96FT9 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.45□□□□□ -1.7
IFT43Q96FT9 AC092268.1-201ENST00000342691 405 ntBASIC4.45□□□□□ -1.7
IFT43Q96FT9 RNA5SP189-201ENST00000364920 115 ntBASIC4.45□□□□□ -1.7
IFT43Q96FT9 SNORA36A-201ENST00000384221 132 ntBASIC4.45□□□□□ -1.7
IFT43Q96FT9 RNA5SP129-201ENST00000410276 118 ntBASIC4.45□□□□□ -1.7
IFT43Q96FT9 Y_RNA.597-201ENST00000410463 100 ntBASIC4.45□□□□□ -1.7
IFT43Q96FT9 RPL23AP26-201ENST00000412728 464 ntBASIC4.45□□□□□ -1.7
IFT43Q96FT9 AP000873.1-201ENST00000463987 400 ntBASIC4.45□□□□□ -1.7
IFT43Q96FT9 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.45□□□□□ -1.7
IFT43Q96FT9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.45□□□□□ -1.7
IFT43Q96FT9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.45□□□□□ -1.7
IFT43Q96FT9 RNA5SP54-201ENST00000516951 92 ntBASIC4.45□□□□□ -1.7
IFT43Q96FT9 AC021231.3-201ENST00000558497 370 ntBASIC4.45□□□□□ -1.7
IFT43Q96FT9 AL360157.1-201ENST00000565962 87 ntBASIC4.45□□□□□ -1.7
IFT43Q96FT9 AC009163.5-201ENST00000575421 637 ntBASIC4.45□□□□□ -1.7
IFT43Q96FT9 MIR4308-201ENST00000580634 81 ntBASIC4.45□□□□□ -1.7
IFT43Q96FT9 AC025946.2-201ENST00000603398 234 ntBASIC4.45□□□□□ -1.7
IFT43Q96FT9 AC114781.5-201ENST00000615297 108 ntBASIC4.45□□□□□ -1.7
IFT43Q96FT9 MTND1P7-201ENST00000632801 297 ntBASIC4.45□□□□□ -1.7
IFT43Q96FT9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
IFT43Q96FT9 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
IFT43Q96FT9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
IFT43Q96FT9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
IFT43Q96FT9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
IFT43Q96FT9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.45□□□□□ -1.7
IFT43Q96FT9 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
IFT43Q96FT9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
IFT43Q96FT9 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
IFT43Q96FT9 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
IFT43Q96FT9 FAM35DP-201ENST00000323387 2712 ntBASIC4.44□□□□□ -1.7
IFT43Q96FT9 RNU5F-3P-201ENST00000363767 117 ntBASIC4.44□□□□□ -1.7
IFT43Q96FT9 Y_RNA.595-201ENST00000410403 105 ntBASIC4.44□□□□□ -1.7
IFT43Q96FT9 RNU2-51P-201ENST00000410708 197 ntBASIC4.44□□□□□ -1.7
IFT43Q96FT9 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.44□□□□□ -1.7
IFT43Q96FT9 AC244670.1-201ENST00000436879 112 ntBASIC4.44□□□□□ -1.7
IFT43Q96FT9 AC010095.1-201ENST00000443543 144 ntBASIC4.44□□□□□ -1.7
IFT43Q96FT9 CKS1BP7-201ENST00000522230 235 ntBASIC4.44□□□□□ -1.7
IFT43Q96FT9 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
IFT43Q96FT9 MIR3160-1-201ENST00000577972 85 ntBASIC4.44□□□□□ -1.7
IFT43Q96FT9 AC079587.1-201ENST00000603846 277 ntBASIC4.44□□□□□ -1.7
IFT43Q96FT9 AC005828.6-201ENST00000606610 232 ntBASIC4.44□□□□□ -1.7
IFT43Q96FT9 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.44□□□□□ -1.7
IFT43Q96FT9 AL359198.2-201ENST00000611836 194 ntBASIC4.44□□□□□ -1.7
IFT43Q96FT9 AC010999.1-201ENST00000611856 324 ntBASIC4.44□□□□□ -1.7
IFT43Q96FT9 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.44□□□□□ -1.7
IFT43Q96FT9 MIR6891-201ENST00000618788 93 ntBASIC4.44□□□□□ -1.7
IFT43Q96FT9 MIR3529-201ENST00000637713 78 ntBASIC4.44□□□□□ -1.7
IFT43Q96FT9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.44□□□□□ -1.7
IFT43Q96FT9 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.44□□□□□ -1.7
IFT43Q96FT9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.44□□□□□ -1.7
IFT43Q96FT9 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.43□□□□□ -1.7
IFT43Q96FT9 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
IFT43Q96FT9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
IFT43Q96FT9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.43□□□□□ -1.7
IFT43Q96FT9 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
IFT43Q96FT9 RNA5SP366-201ENST00000365454 123 ntBASIC4.43□□□□□ -1.7
IFT43Q96FT9 RNU6-213P-201ENST00000384051 104 ntBASIC4.43□□□□□ -1.7
IFT43Q96FT9 SNORA70C-201ENST00000384538 135 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms