Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AC012308.1-201ENST00000451232 178 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 RNU7-138P-201ENST00000459479 64 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 AC083906.5-201ENST00000503722 328 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 SNORA25.11-201ENST00000515935 105 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 SNORA43.2-201ENST00000516652 128 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 AC087854.1-201ENST00000519706 414 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 AC243972.3-201ENST00000539655 198 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 AC103996.1-201ENST00000555468 102 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 AC026464.5-201ENST00000562497 722 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 AC005730.3-201ENST00000583067 366 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 AL391813.1-201ENST00000603098 260 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 AL356280.1-201ENST00000603614 379 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 AL121917.1-203ENST00000605534 577 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 FAM157A-202ENST00000615155 405 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 RMST_7.1-201ENST00000621935 268 ntBASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SH3KBP1Q96B97 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 MAPK10-266ENST00000641066 6555 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 RNU6-527P-201ENST00000363425 104 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 SNORD113-7-201ENST00000363762 77 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 RNU6-1083P-201ENST00000384022 107 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 FGF7P8-201ENST00000402994 292 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 VN1R36P-201ENST00000414936 291 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 AL096701.2-201ENST00000416920 238 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 MTND4LP11-201ENST00000422184 280 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 RNU7-66P-201ENST00000459469 62 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 RPL23AP49-201ENST00000492925 468 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 AC097462.2-201ENST00000504623 481 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 RNU5F-8P-201ENST00000515941 111 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 RNU6-377P-201ENST00000515965 102 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 SCARNA17.1-201ENST00000516211 143 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 SCARNA17.2-201ENST00000516334 143 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 AP005597.4-201ENST00000526762 229 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 EIF4BP1-201ENST00000554881 351 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 MIR548S-201ENST00000581352 82 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 AC090616.3-201ENST00000582184 217 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 RPL12P50-201ENST00000603116 116 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 SCARNA17.4-201ENST00000614296 143 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 DUXAP9-208ENST00000622815 614 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 AC138627.2-201ENST00000624202 601 ntBASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SH3KBP1Q96B97 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 SNORD56.1-201ENST00000362913 68 ntBASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 U3.12-201ENST00000364498 214 ntBASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 AL445529.1-201ENST00000398713 389 ntBASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 RPL21P111-201ENST00000418453 477 ntBASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 AC004383.1-201ENST00000438135 289 ntBASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 PPP1R2P5-201ENST00000457256 603 ntBASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 PMCHL2-203ENST00000457791 237 ntBASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 AC107626.1-201ENST00000471084 183 ntBASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 TRBVA-201ENST00000498804 316 ntBASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 RPL39P5-202ENST00000512505 151 ntBASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 RN7SKP256-201ENST00000517201 314 ntBASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 SCOCP1-201ENST00000554676 349 ntBASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 MIR3672-201ENST00000584290 82 ntBASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 AC024153.1-201ENST00000603103 365 ntBASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 AC064836.2-201ENST00000609491 462 ntBASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 AC069234.5-201ENST00000611056 416 ntBASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
SH3KBP1Q96B97 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SH3KBP1Q96B97 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.93□□□□□ -1.94
SH3KBP1Q96B97 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SH3KBP1Q96B97 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.93□□□□□ -1.94
SH3KBP1Q96B97 SNORA72.1-201ENST00000363485 129 ntBASIC2.93□□□□□ -1.94
SH3KBP1Q96B97 SNORA54-201ENST00000384281 123 ntBASIC2.93□□□□□ -1.94
SH3KBP1Q96B97 RNY3P14-201ENST00000384309 102 ntBASIC2.93□□□□□ -1.94
SH3KBP1Q96B97 RNU6-748P-201ENST00000384648 107 ntBASIC2.93□□□□□ -1.94
SH3KBP1Q96B97 RNU6-1140P-201ENST00000410517 106 ntBASIC2.93□□□□□ -1.94
SH3KBP1Q96B97 IFNA20P-201ENST00000436840 528 ntBASIC2.93□□□□□ -1.94
SH3KBP1Q96B97 MTCO3P18-201ENST00000440206 761 ntBASIC2.93□□□□□ -1.94
SH3KBP1Q96B97 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.93□□□□□ -1.94
SH3KBP1Q96B97 AC104389.3-201ENST00000445629 235 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 1163.3 ms