Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AMZ2P1-203ENST00000565833 850 ntBASIC4.05□□□□□ -1.76
BRF1Q92994 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
BRF1Q92994 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
BRF1Q92994 AC010615.1-201ENST00000594254 1764 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRF1Q92994 FTLP6-201ENST00000355274 422 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 Y_RNA.26-201ENST00000362539 101 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 Y_RNA.64-201ENST00000362845 102 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 RNU1-76P-201ENST00000362903 159 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 Y_RNA.183-201ENST00000363882 113 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 Z98749.2-208ENST00000381646 500 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 Y_RNA.471-201ENST00000384312 102 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 MIR325-201ENST00000385260 98 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 SNORD17-201ENST00000390930 237 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 MIR190B-201ENST00000401119 79 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 RNA5SP129-201ENST00000410276 118 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 AP000907.1-201ENST00000428428 510 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 RBMY2UP-201ENST00000453474 324 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 AC006026.2-201ENST00000457376 180 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.04□□□□□ -1.76
BRF1Q92994 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.04□□□□□ -1.76
BRF1Q92994 SNORA31.18-201ENST00000517043 134 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 RNU6-1183P-201ENST00000517054 60 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.04□□□□□ -1.76
BRF1Q92994 LINC00933-203ENST00000559812 219 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.04□□□□□ -1.76
BRF1Q92994 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.04□□□□□ -1.76
BRF1Q92994 AC024153.1-201ENST00000603103 365 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 MIR7851-201ENST00000610611 160 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 AC130454.1-201ENST00000622948 401 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRF1Q92994 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRF1Q92994 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
BRF1Q92994 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
BRF1Q92994 TNPO1P3-201ENST00000436471 2662 ntBASIC4.04□□□□□ -1.76
BRF1Q92994 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRF1Q92994 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
BRF1Q92994 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.03□□□□□ -1.76
BRF1Q92994 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
BRF1Q92994 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
BRF1Q92994 Y_RNA.27-201ENST00000362540 103 ntBASIC4.03□□□□□ -1.76
BRF1Q92994 RNU4-35P-201ENST00000362588 141 ntBASIC4.03□□□□□ -1.76
BRF1Q92994 RNA5SP197-201ENST00000363357 119 ntBASIC4.03□□□□□ -1.76
BRF1Q92994 RNU6-105P-201ENST00000363909 104 ntBASIC4.03□□□□□ -1.76
BRF1Q92994 RNU6-806P-201ENST00000365147 105 ntBASIC4.03□□□□□ -1.76
BRF1Q92994 Y_RNA.483-201ENST00000384380 101 ntBASIC4.03□□□□□ -1.76
BRF1Q92994 Y_RNA.552-201ENST00000384665 112 ntBASIC4.03□□□□□ -1.76
BRF1Q92994 Y_RNA.562-201ENST00000384695 113 ntBASIC4.03□□□□□ -1.76
BRF1Q92994 MIR518D-201ENST00000385014 87 ntBASIC4.03□□□□□ -1.76
BRF1Q92994 RNA5SP239-201ENST00000410218 129 ntBASIC4.03□□□□□ -1.76
BRF1Q92994 ARL5AP4-201ENST00000430731 512 ntBASIC4.03□□□□□ -1.76
BRF1Q92994 AC091286.1-201ENST00000431233 461 ntBASIC4.03□□□□□ -1.76
BRF1Q92994 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.03□□□□□ -1.76
BRF1Q92994 RPEP5-201ENST00000441137 268 ntBASIC4.03□□□□□ -1.76
BRF1Q92994 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.03□□□□□ -1.76
BRF1Q92994 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.03□□□□□ -1.76
BRF1Q92994 AC025465.3-201ENST00000510570 311 ntBASIC4.03□□□□□ -1.76
BRF1Q92994 AC107222.1-201ENST00000510899 637 ntBASIC4.03□□□□□ -1.76
BRF1Q92994 AP004607.1-201ENST00000524456 203 ntBASIC4.03□□□□□ -1.76
BRF1Q92994 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.03□□□□□ -1.76
BRF1Q92994 HSPE1P20-201ENST00000538133 289 ntBASIC4.03□□□□□ -1.76
BRF1Q92994 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.03□□□□□ -1.76
BRF1Q92994 AC060766.3-201ENST00000591442 263 ntBASIC4.03□□□□□ -1.76
BRF1Q92994 AC006557.5-201ENST00000603126 811 ntBASIC4.03□□□□□ -1.76
BRF1Q92994 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.03□□□□□ -1.76
BRF1Q92994 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.03□□□□□ -1.76
BRF1Q92994 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
BRF1Q92994 Z75746.1-201ENST00000440243 2080 ntBASIC4.02□□□□□ -1.77
BRF1Q92994 AC058791.1-201ENST00000608412 3198 ntBASIC4.02□□□□□ -1.77
BRF1Q92994 RNU6-778P-201ENST00000363269 103 ntBASIC4.02□□□□□ -1.77
BRF1Q92994 Y_RNA.123-201ENST00000363338 102 ntBASIC4.02□□□□□ -1.77
BRF1Q92994 U3.13-201ENST00000364804 214 ntBASIC4.02□□□□□ -1.77
BRF1Q92994 RPL26P27-201ENST00000414397 437 ntBASIC4.02□□□□□ -1.77
BRF1Q92994 AC139712.2-201ENST00000424302 339 ntBASIC4.02□□□□□ -1.77
BRF1Q92994 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.02□□□□□ -1.77
BRF1Q92994 AC124916.1-201ENST00000444020 547 ntBASIC4.02□□□□□ -1.77
BRF1Q92994 AL513124.1-201ENST00000450410 614 ntBASIC4.02□□□□□ -1.77
BRF1Q92994 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.02□□□□□ -1.77
BRF1Q92994 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.02□□□□□ -1.77
BRF1Q92994 RNU6-397P-201ENST00000516226 104 ntBASIC4.02□□□□□ -1.77
BRF1Q92994 RNU1-103P-201ENST00000516502 125 ntBASIC4.02□□□□□ -1.77
BRF1Q92994 SNORA43.2-201ENST00000516652 128 ntBASIC4.02□□□□□ -1.77
BRF1Q92994 MIR2355-201ENST00000517199 87 ntBASIC4.02□□□□□ -1.77
BRF1Q92994 CASP1P1-201ENST00000526345 212 ntBASIC4.02□□□□□ -1.77
BRF1Q92994 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.02□□□□□ -1.77
BRF1Q92994 AL442163.3-201ENST00000554110 156 ntBASIC4.02□□□□□ -1.77
BRF1Q92994 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.02□□□□□ -1.77
BRF1Q92994 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.02□□□□□ -1.77
BRF1Q92994 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.02□□□□□ -1.77
BRF1Q92994 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BRF1Q92994 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
BRF1Q92994 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.01□□□□□ -1.77
BRF1Q92994 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRF1Q92994 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRF1Q92994 Y_RNA.14-201ENST00000362415 103 ntBASIC4.01□□□□□ -1.77
BRF1Q92994 Y_RNA.405-201ENST00000383979 100 ntBASIC4.01□□□□□ -1.77
BRF1Q92994 Y_RNA.451-201ENST00000384200 100 ntBASIC4.01□□□□□ -1.77
BRF1Q92994 Y_RNA.524-201ENST00000384564 100 ntBASIC4.01□□□□□ -1.77
BRF1Q92994 Y_RNA.561-201ENST00000384694 100 ntBASIC4.01□□□□□ -1.77
BRF1Q92994 BTF3L4P2-201ENST00000392798 346 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms