Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AC100870.1-201ENST00000522035 505 ntBASIC3.85□□□□□ -1.79
SH3RF3Q8TEJ3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.85□□□□□ -1.79
SH3RF3Q8TEJ3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.85□□□□□ -1.79
SH3RF3Q8TEJ3 AL162274.2-201ENST00000614406 332 ntBASIC3.85□□□□□ -1.79
SH3RF3Q8TEJ3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SH3RF3Q8TEJ3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SH3RF3Q8TEJ3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 Y_RNA.183-201ENST00000363882 113 ntBASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 Y_RNA.269-201ENST00000364685 89 ntBASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 RNU6-1303P-201ENST00000364841 107 ntBASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 RNU6-1329P-201ENST00000365664 107 ntBASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 RNU6-754P-201ENST00000391166 107 ntBASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 AL139039.1-201ENST00000401900 692 ntBASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 RNU6-516P-201ENST00000411381 104 ntBASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 RPEP5-201ENST00000441137 268 ntBASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 TMSB4XP3-201ENST00000445144 114 ntBASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 AL138752.1-201ENST00000452964 351 ntBASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 RPL7P47-201ENST00000497299 556 ntBASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 RNU6-27P-201ENST00000516146 107 ntBASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 UBL5P2-201ENST00000583788 219 ntBASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 MIR4298-201ENST00000584380 73 ntBASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 AC073410.2-201ENST00000603240 332 ntBASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 AC002044.1-201ENST00000606707 158 ntBASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 AC110801.1-201ENST00000623590 212 ntBASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 AL450472.1-202ENST00000637286 180 ntBASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SH3RF3Q8TEJ3 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 Y_RNA.65-201ENST00000362846 100 ntBASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 snoU2_19.2-201ENST00000363024 80 ntBASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 Y_RNA.526-201ENST00000384572 110 ntBASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 RNA5SP129-201ENST00000410276 118 ntBASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 UBE2FP1-201ENST00000416536 447 ntBASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 EIF4EP2-201ENST00000422816 654 ntBASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 RNU7-169P-201ENST00000459456 61 ntBASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 S100A11P2-201ENST00000467589 312 ntBASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 RNU4-71P-201ENST00000516258 113 ntBASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 AC034114.1-201ENST00000520293 285 ntBASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 AP006587.4-201ENST00000526053 529 ntBASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 CBX3P4-201ENST00000538909 354 ntBASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 MIR548AI-201ENST00000579940 88 ntBASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 AL589994.2-201ENST00000621124 579 ntBASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 AP001148.1-201ENST00000624124 2359 ntBASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 AL137003.2-201ENST00000606924 2538 ntBASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SH3RF3Q8TEJ3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 MIR422A-201ENST00000362286 90 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 RNA5SP295-201ENST00000362655 121 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 RNY1P16-201ENST00000363063 111 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 Y_RNA.200-201ENST00000364018 102 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 RNU6-708P-201ENST00000384217 107 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 Y_RNA.471-201ENST00000384312 102 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 U3.42-201ENST00000408746 214 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 RPL21P24-201ENST00000413752 448 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 AC092809.3-201ENST00000415453 231 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 AL451074.5-201ENST00000415894 435 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 AL591704.1-201ENST00000432574 275 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 RPL35AP22-201ENST00000436855 335 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 NEFMP1-201ENST00000443423 1006 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 HMGN2P16-201ENST00000456802 261 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 AL136097.1-201ENST00000456945 913 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 HMGB1P25-201ENST00000468402 607 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 RPL27AP5-201ENST00000469428 449 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 AC021205.2-201ENST00000480069 347 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 RNU7-4P-201ENST00000516961 62 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 AP002770.2-201ENST00000543613 532 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 AC126177.3-201ENST00000551839 688 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 MIR4643-201ENST00000577473 78 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 AC012119.1-201ENST00000603184 222 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 AL390123.1-201ENST00000603216 237 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 AL670379.6-201ENST00000603753 252 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 AL670379.1-201ENST00000604752 252 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 AL670379.5-201ENST00000605253 252 ntBASIC3.82□□□□□ -1.8
SH3RF3Q8TEJ3 AL034351.1-201ENST00000605288 668 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms