Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RNA5SP130-201ENST00000364431 114 ntBASIC3.72□□□□□ -1.81
NUP43Q8NFH3 RNU1-100P-201ENST00000365255 165 ntBASIC3.72□□□□□ -1.81
NUP43Q8NFH3 AL359837.1-201ENST00000381357 287 ntBASIC3.72□□□□□ -1.81
NUP43Q8NFH3 RNU1-73P-201ENST00000383971 164 ntBASIC3.72□□□□□ -1.81
NUP43Q8NFH3 Y_RNA.506-201ENST00000384494 102 ntBASIC3.72□□□□□ -1.81
NUP43Q8NFH3 SNORD116-20-201ENST00000384529 92 ntBASIC3.72□□□□□ -1.81
NUP43Q8NFH3 MIR134-201ENST00000385258 73 ntBASIC3.72□□□□□ -1.81
NUP43Q8NFH3 RNU6-651P-201ENST00000411040 105 ntBASIC3.72□□□□□ -1.81
NUP43Q8NFH3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.72□□□□□ -1.81
NUP43Q8NFH3 NDUFB4P10-201ENST00000452541 359 ntBASIC3.72□□□□□ -1.81
NUP43Q8NFH3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.72□□□□□ -1.81
NUP43Q8NFH3 AC074198.2-201ENST00000508153 258 ntBASIC3.72□□□□□ -1.81
NUP43Q8NFH3 AC026726.1-201ENST00000512859 601 ntBASIC3.72□□□□□ -1.81
NUP43Q8NFH3 RNU6-861P-201ENST00000516745 106 ntBASIC3.72□□□□□ -1.81
NUP43Q8NFH3 AC016256.1-201ENST00000547971 354 ntBASIC3.72□□□□□ -1.81
NUP43Q8NFH3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.72□□□□□ -1.81
NUP43Q8NFH3 AC106785.1-201ENST00000565935 262 ntBASIC3.72□□□□□ -1.81
NUP43Q8NFH3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.72□□□□□ -1.81
NUP43Q8NFH3 AC012468.1-201ENST00000604888 430 ntBASIC3.72□□□□□ -1.81
NUP43Q8NFH3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.72□□□□□ -1.81
NUP43Q8NFH3 AC024581.2-201ENST00000619986 252 ntBASIC3.72□□□□□ -1.81
NUP43Q8NFH3 AC112200.1-201ENST00000625015 234 ntBASIC3.72□□□□□ -1.81
NUP43Q8NFH3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.72□□□□□ -1.81
NUP43Q8NFH3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NUP43Q8NFH3 SRP72P2-201ENST00000344851 1979 ntBASIC3.72□□□□□ -1.81
NUP43Q8NFH3 IPO8P1-201ENST00000455509 3109 ntBASIC3.72□□□□□ -1.81
NUP43Q8NFH3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
NUP43Q8NFH3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NUP43Q8NFH3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
NUP43Q8NFH3 MAPK10-253ENST00000641010 4072 ntBASIC3.71□□□□□ -1.81
NUP43Q8NFH3 AL079305.1-201ENST00000623159 3008 ntBASIC3.71□□□□□ -1.81
NUP43Q8NFH3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.71□□□□□ -1.82
NUP43Q8NFH3 AC090740.1-201ENST00000623193 2262 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.71□□□□□ -1.82
NUP43Q8NFH3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
NUP43Q8NFH3 RNU6-600P-201ENST00000362524 99 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 RNA5SP502-201ENST00000362694 119 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 RNA5SP399-201ENST00000364003 117 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 RNU1-140P-201ENST00000365040 165 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 Y_RNA.319-201ENST00000365138 92 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 RNU6-47P-201ENST00000383866 107 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 RNU6-281P-201ENST00000384212 103 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 Y_RNA.569-201ENST00000384749 103 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 MIR487A-201ENST00000385009 80 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 RPS26P8-201ENST00000393490 348 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 RNU6-1140P-201ENST00000410517 106 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 RNU5A-5P-201ENST00000411054 116 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 RNA5SP39-201ENST00000411245 120 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 RNU6-1001P-201ENST00000411265 100 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 HMGB1P37-201ENST00000439613 609 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 AP000873.1-201ENST00000463987 400 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 RNU6-567P-201ENST00000516746 107 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NUP43Q8NFH3 AC025884.1-201ENST00000556034 378 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 UBL5P4-201ENST00000562584 236 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 MIR5571-201ENST00000577998 113 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 AL356157.2-201ENST00000605122 111 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 MIR4727-201ENST00000622232 55 ntBASIC3.71□□□□□ -1.82
NUP43Q8NFH3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NUP43Q8NFH3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
NUP43Q8NFH3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.71□□□□□ -1.82
NUP43Q8NFH3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NUP43Q8NFH3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.7□□□□□ -1.82
NUP43Q8NFH3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
NUP43Q8NFH3 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 SNORD56.1-201ENST00000362913 68 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 Y_RNA.275-201ENST00000364726 110 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 Y_RNA.292-201ENST00000364904 97 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 Y_RNA.570-201ENST00000384750 101 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 MIR3074-201ENST00000384885 81 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 MTHFD2P2-201ENST00000407725 247 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 RNU6-1245P-201ENST00000411130 106 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.7□□□□□ -1.82
NUP43Q8NFH3 HMGN2P30-201ENST00000423237 256 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.7□□□□□ -1.82
NUP43Q8NFH3 AL691449.1-201ENST00000426570 421 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 WARS2P1-201ENST00000429678 537 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.7□□□□□ -1.82
NUP43Q8NFH3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.7□□□□□ -1.82
NUP43Q8NFH3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.7□□□□□ -1.82
NUP43Q8NFH3 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.7□□□□□ -1.82
NUP43Q8NFH3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.7□□□□□ -1.82
NUP43Q8NFH3 MRPL42P6-201ENST00000486397 371 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 RPL7P47-201ENST00000497299 556 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 AC097462.2-201ENST00000504623 481 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 RNU7-110P-201ENST00000516891 62 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 CR383656.8-201ENST00000549046 145 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 MIR5695-201ENST00000579717 85 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 MIR4282-201ENST00000583613 67 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 AC005296.1-201ENST00000616145 209 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 ZYXP1-201ENST00000617638 118 ntBASIC3.7□□□□□ -1.82
NUP43Q8NFH3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NUP43Q8NFH3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NUP43Q8NFH3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NUP43Q8NFH3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NUP43Q8NFH3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NUP43Q8NFH3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NUP43Q8NFH3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUP43Q8NFH3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms