Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AL591212.2-201ENST00000433923 257 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 AL139824.2-201ENST00000458731 1095 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 RNVU1-2-201ENST00000516326 135 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 AC092325.1-201ENST00000566449 554 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 MIR4422-201ENST00000581938 83 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 MIR4452-201ENST00000583004 71 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 CYP2C61P-201ENST00000604072 290 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 AC004908.3-201ENST00000610248 625 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 AC130324.3-201ENST00000614165 542 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 MIR8074-201ENST00000615081 81 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 AL138955.1-201ENST00000622881 1040 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 AL356596.1-201ENST00000624230 379 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 FARSBP1-201ENST00000435808 1778 ntBASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.23□□□□□ -2.21
CCDC112Q8NEF3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 RNU6-858P-201ENST00000362436 107 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 Y_RNA.33-201ENST00000362591 102 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 RNU4-91P-201ENST00000364778 135 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 RNU6-487P-201ENST00000365430 104 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 RNU6-546P-201ENST00000383991 107 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 RNU6-622P-201ENST00000384272 103 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 RNU6-1000P-201ENST00000391066 106 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 RNU1-78P-201ENST00000391248 165 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 AC138623.1-201ENST00000418060 216 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 MRPL35P3-201ENST00000421557 364 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 EEF1A1P39-201ENST00000440791 250 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 AL606517.1-201ENST00000446914 387 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 AC245102.2-201ENST00000448956 180 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 HMGN2P18-201ENST00000450680 270 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 AP001025.1-201ENST00000486139 332 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 AF131216.2-201ENST00000512316 564 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 AL078603.1-201ENST00000603824 313 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 AL022345.1-201ENST00000607292 135 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 Z82243.1-201ENST00000609432 473 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 MIR3529-201ENST00000637713 78 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 AC099786.3-201ENST00000565735 1410 ntBASIC1.22□□□□□ -2.21
CCDC112Q8NEF3 Y_RNA.40-201ENST00000362645 93 ntBASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 RNU6-511P-201ENST00000363496 107 ntBASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 RNU5E-10P-201ENST00000363506 118 ntBASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 RNU6-944P-201ENST00000364023 107 ntBASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 SNORA48.1-201ENST00000390879 135 ntBASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 RNU4-22P-201ENST00000411058 166 ntBASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 AC092809.3-201ENST00000415453 231 ntBASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 Z73417.1-201ENST00000447373 778 ntBASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 CR383656.8-201ENST00000549046 145 ntBASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 MTCYBP33-201ENST00000575007 1130 ntBASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 BNIP3P30-201ENST00000601184 574 ntBASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 AC103810.9-201ENST00000606688 112 ntBASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 MIR15A-201ENST00000607334 83 ntBASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 AC091965.4-201ENST00000607691 587 ntBASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 MIR7111-201ENST00000619751 72 ntBASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 AC009269.6-201ENST00000621778 588 ntBASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC112Q8NEF3 HAUS6P2-201ENST00000433254 2404 ntBASIC1.2□□□□□ -2.22
CCDC112Q8NEF3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CCDC112Q8NEF3 RNU6-271P-201ENST00000363858 105 ntBASIC1.2□□□□□ -2.22
CCDC112Q8NEF3 SNORA4.1-201ENST00000364263 144 ntBASIC1.2□□□□□ -2.22
CCDC112Q8NEF3 RNU6-53P-201ENST00000365367 106 ntBASIC1.2□□□□□ -2.22
CCDC112Q8NEF3 RNY3P13-201ENST00000365542 102 ntBASIC1.2□□□□□ -2.22
CCDC112Q8NEF3 RNU5E-6P-201ENST00000365574 115 ntBASIC1.2□□□□□ -2.22
CCDC112Q8NEF3 ELOCP17-201ENST00000414751 326 ntBASIC1.2□□□□□ -2.22
CCDC112Q8NEF3 ELOCP9-201ENST00000418624 239 ntBASIC1.2□□□□□ -2.22
CCDC112Q8NEF3 AL365338.1-201ENST00000422282 858 ntBASIC1.2□□□□□ -2.22
CCDC112Q8NEF3 USP9YP18-201ENST00000425912 695 ntBASIC1.2□□□□□ -2.22
CCDC112Q8NEF3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC112Q8NEF3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.2□□□□□ -2.22
CCDC112Q8NEF3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC112Q8NEF3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC112Q8NEF3 AL583843.1-201ENST00000456070 346 ntBASIC1.2□□□□□ -2.22
CCDC112Q8NEF3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms