Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 CDC27P3-201ENST00000635418 1910 ntBASIC3.07□□□□□ -1.92
USP38Q8NB14 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
USP38Q8NB14 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
USP38Q8NB14 MIR512-1-201ENST00000384913 84 ntBASIC3.07□□□□□ -1.92
USP38Q8NB14 MIR514A2-201ENST00000385131 88 ntBASIC3.07□□□□□ -1.92
USP38Q8NB14 MIR514A3-201ENST00000385132 88 ntBASIC3.07□□□□□ -1.92
USP38Q8NB14 FTH1P15-201ENST00000406984 280 ntBASIC3.07□□□□□ -1.92
USP38Q8NB14 RAP1BP3-201ENST00000407180 549 ntBASIC3.07□□□□□ -1.92
USP38Q8NB14 RPLP0P7-201ENST00000416050 667 ntBASIC3.07□□□□□ -1.92
USP38Q8NB14 PTGES3P4-201ENST00000426243 356 ntBASIC3.07□□□□□ -1.92
USP38Q8NB14 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.07□□□□□ -1.92
USP38Q8NB14 GSTA11P-201ENST00000452866 669 ntBASIC3.07□□□□□ -1.92
USP38Q8NB14 AC107626.1-201ENST00000471084 183 ntBASIC3.07□□□□□ -1.92
USP38Q8NB14 RPL31P41-201ENST00000477967 372 ntBASIC3.07□□□□□ -1.92
USP38Q8NB14 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.07□□□□□ -1.92
USP38Q8NB14 AF213884.2-201ENST00000510417 903 ntBASIC3.07□□□□□ -1.92
USP38Q8NB14 AC113155.1-201ENST00000511141 769 ntBASIC3.07□□□□□ -1.92
USP38Q8NB14 ACA59.2-201ENST00000517061 156 ntBASIC3.07□□□□□ -1.92
USP38Q8NB14 AC069113.1-201ENST00000517763 267 ntBASIC3.07□□□□□ -1.92
USP38Q8NB14 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.07□□□□□ -1.92
USP38Q8NB14 AP004607.1-201ENST00000524456 203 ntBASIC3.07□□□□□ -1.92
USP38Q8NB14 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.07□□□□□ -1.92
USP38Q8NB14 AC090115.3-201ENST00000553218 849 ntBASIC3.07□□□□□ -1.92
USP38Q8NB14 AL133241.1-201ENST00000556832 487 ntBASIC3.07□□□□□ -1.92
USP38Q8NB14 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
USP38Q8NB14 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.06□□□□□ -1.92
USP38Q8NB14 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
USP38Q8NB14 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
USP38Q8NB14 RNU6-82P-201ENST00000363970 107 ntBASIC3.06□□□□□ -1.92
USP38Q8NB14 RNU6-373P-201ENST00000411247 98 ntBASIC3.06□□□□□ -1.92
USP38Q8NB14 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.06□□□□□ -1.92
USP38Q8NB14 Z98742.3-201ENST00000418637 326 ntBASIC3.06□□□□□ -1.92
USP38Q8NB14 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.06□□□□□ -1.92
USP38Q8NB14 MRPS10P2-201ENST00000431226 381 ntBASIC3.06□□□□□ -1.92
USP38Q8NB14 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.06□□□□□ -1.92
USP38Q8NB14 USP9YP28-201ENST00000435142 589 ntBASIC3.06□□□□□ -1.92
USP38Q8NB14 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.06□□□□□ -1.92
USP38Q8NB14 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.06□□□□□ -1.92
USP38Q8NB14 RNU6-1208P-201ENST00000459588 107 ntBASIC3.06□□□□□ -1.92
USP38Q8NB14 AC087884.1-201ENST00000469738 328 ntBASIC3.06□□□□□ -1.92
USP38Q8NB14 MRPL42P6-201ENST00000486397 371 ntBASIC3.06□□□□□ -1.92
USP38Q8NB14 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
USP38Q8NB14 AC069439.1-201ENST00000494739 167 ntBASIC3.06□□□□□ -1.92
USP38Q8NB14 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
USP38Q8NB14 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.06□□□□□ -1.92
USP38Q8NB14 HPRT1P3-201ENST00000539521 576 ntBASIC3.06□□□□□ -1.92
USP38Q8NB14 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.06□□□□□ -1.92
USP38Q8NB14 AC023043.3-201ENST00000593113 385 ntBASIC3.06□□□□□ -1.92
USP38Q8NB14 AC091152.3-201ENST00000604227 325 ntBASIC3.06□□□□□ -1.92
USP38Q8NB14 RNU6-85P-201ENST00000605989 107 ntBASIC3.06□□□□□ -1.92
USP38Q8NB14 AL357078.3-201ENST00000607528 618 ntBASIC3.06□□□□□ -1.92
USP38Q8NB14 AC068944.2-201ENST00000610373 403 ntBASIC3.06□□□□□ -1.92
USP38Q8NB14 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.06□□□□□ -1.92
USP38Q8NB14 SCARNA4-202ENST00000625402 129 ntBASIC3.06□□□□□ -1.92
USP38Q8NB14 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
USP38Q8NB14 AC080128.1-201ENST00000474389 1917 ntBASIC3.05□□□□□ -1.92
USP38Q8NB14 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.05□□□□□ -1.92
USP38Q8NB14 RNU1-112P-201ENST00000364401 164 ntBASIC3.05□□□□□ -1.92
USP38Q8NB14 RNU5E-7P-201ENST00000365290 117 ntBASIC3.05□□□□□ -1.92
USP38Q8NB14 RNU1-109P-201ENST00000383960 147 ntBASIC3.05□□□□□ -1.92
USP38Q8NB14 AL133475.1-201ENST00000404414 305 ntBASIC3.05□□□□□ -1.92
USP38Q8NB14 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.05□□□□□ -1.92
USP38Q8NB14 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.05□□□□□ -1.92
USP38Q8NB14 MTND1P23-201ENST00000416931 372 ntBASIC3.05□□□□□ -1.92
USP38Q8NB14 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.05□□□□□ -1.92
USP38Q8NB14 AL441985.1-201ENST00000457727 251 ntBASIC3.05□□□□□ -1.92
USP38Q8NB14 MTCYBP18-201ENST00000501056 747 ntBASIC3.05□□□□□ -1.92
USP38Q8NB14 SEM1P1-201ENST00000506694 209 ntBASIC3.05□□□□□ -1.92
USP38Q8NB14 AC079140.5-201ENST00000507882 310 ntBASIC3.05□□□□□ -1.92
USP38Q8NB14 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.05□□□□□ -1.92
USP38Q8NB14 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.05□□□□□ -1.92
USP38Q8NB14 SNORA19.2-201ENST00000516013 114 ntBASIC3.05□□□□□ -1.92
USP38Q8NB14 SNORA14.1-201ENST00000516113 141 ntBASIC3.05□□□□□ -1.92
USP38Q8NB14 RNA5SP458-201ENST00000516188 119 ntBASIC3.05□□□□□ -1.92
USP38Q8NB14 SNORD19.2-201ENST00000516978 73 ntBASIC3.05□□□□□ -1.92
USP38Q8NB14 SNORA25.17-201ENST00000517184 124 ntBASIC3.05□□□□□ -1.92
USP38Q8NB14 RNU6-323P-201ENST00000521915 107 ntBASIC3.05□□□□□ -1.92
USP38Q8NB14 MTCO3P23-201ENST00000561363 289 ntBASIC3.05□□□□□ -1.92
USP38Q8NB14 MIR3941-201ENST00000582572 103 ntBASIC3.05□□□□□ -1.92
USP38Q8NB14 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
USP38Q8NB14 AC123912.5-201ENST00000605470 343 ntBASIC3.05□□□□□ -1.92
USP38Q8NB14 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.05□□□□□ -1.92
USP38Q8NB14 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
USP38Q8NB14 ZNF72P-201ENST00000425869 1908 ntBASIC3.05□□□□□ -1.92
USP38Q8NB14 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
USP38Q8NB14 AC138393.1-203ENST00000327086 343 ntBASIC3.04□□□□□ -1.92
USP38Q8NB14 RNU6-1252P-201ENST00000363054 104 ntBASIC3.04□□□□□ -1.92
USP38Q8NB14 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
USP38Q8NB14 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.04□□□□□ -1.92
USP38Q8NB14 RN7SKP192-201ENST00000411291 327 ntBASIC3.04□□□□□ -1.92
USP38Q8NB14 MTND1P2-201ENST00000430604 821 ntBASIC3.04□□□□□ -1.92
USP38Q8NB14 AL513043.1-201ENST00000439124 535 ntBASIC3.04□□□□□ -1.92
USP38Q8NB14 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.04□□□□□ -1.92
USP38Q8NB14 AL031274.1-201ENST00000450334 232 ntBASIC3.04□□□□□ -1.92
USP38Q8NB14 RN7SL499P-201ENST00000481141 276 ntBASIC3.04□□□□□ -1.92
USP38Q8NB14 RN7SL297P-201ENST00000483161 293 ntBASIC3.04□□□□□ -1.92
USP38Q8NB14 RPL7P20-201ENST00000520308 745 ntBASIC3.04□□□□□ -1.92
USP38Q8NB14 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.04□□□□□ -1.92
USP38Q8NB14 OR1M4P-201ENST00000589199 287 ntBASIC3.04□□□□□ -1.92
USP38Q8NB14 APOOP1-201ENST00000604695 592 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms