Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC63Q8NA47 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC63Q8NA47 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC63Q8NA47 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC63Q8NA47 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC63Q8NA47 MTCO3P38-201ENST00000468910 766 ntBASIC2.39□□□□□ -2.03
CCDC63Q8NA47 AC108043.1-201ENST00000512696 574 ntBASIC2.39□□□□□ -2.03
CCDC63Q8NA47 RN7SKP24-201ENST00000515888 284 ntBASIC2.39□□□□□ -2.03
CCDC63Q8NA47 RNU4-29P-201ENST00000515943 174 ntBASIC2.39□□□□□ -2.03
CCDC63Q8NA47 RNU6-1038P-201ENST00000516516 104 ntBASIC2.39□□□□□ -2.03
CCDC63Q8NA47 AC023050.3-201ENST00000541142 333 ntBASIC2.39□□□□□ -2.03
CCDC63Q8NA47 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC63Q8NA47 AL021997.1-201ENST00000605757 193 ntBASIC2.39□□□□□ -2.03
CCDC63Q8NA47 RNU6-6P-201ENST00000606623 107 ntBASIC2.39□□□□□ -2.03
CCDC63Q8NA47 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC63Q8NA47 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.39□□□□□ -2.03
CCDC63Q8NA47 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC63Q8NA47 AC244517.12-201ENST00000623581 663 ntBASIC2.39□□□□□ -2.03
CCDC63Q8NA47 MIR3529-201ENST00000637713 78 ntBASIC2.39□□□□□ -2.03
CCDC63Q8NA47 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CCDC63Q8NA47 Y_RNA.167-201ENST00000363735 109 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 RNU6-1090P-201ENST00000364065 94 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 AL590002.1-201ENST00000406554 418 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC63Q8NA47 TOMM20P4-201ENST00000427861 435 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 AL121601.2-201ENST00000438019 707 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 AC112771.1-201ENST00000463581 102 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 AC104435.1-201ENST00000483483 166 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 RPL36AP48-201ENST00000485521 314 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC63Q8NA47 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC63Q8NA47 SMURF2P1-201ENST00000514992 481 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 RNA5SP112-201ENST00000515937 99 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 RNU6-1281P-201ENST00000516223 105 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC63Q8NA47 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC63Q8NA47 CENPUP1-201ENST00000526649 1202 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC63Q8NA47 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC63Q8NA47 AC010186.2-204ENST00000537668 439 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 AC027807.1-201ENST00000559921 996 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 AC136619.2-201ENST00000563361 631 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC63Q8NA47 APOOP1-201ENST00000604695 592 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 AC021646.1-201ENST00000605469 484 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC63Q8NA47 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.38□□□□□ -2.03
CCDC63Q8NA47 U2.17-201ENST00000611454 95 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 AL442067.2-201ENST00000614033 363 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 YWHAEP7-203ENST00000622054 312 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 U4.7-201ENST00000638126 106 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC63Q8NA47 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC63Q8NA47 HAUS6P2-201ENST00000433254 2404 ntBASIC2.38□□□□□ -2.03
CCDC63Q8NA47 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC63Q8NA47 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CCDC63Q8NA47 Z75746.1-201ENST00000440243 2080 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC63Q8NA47 RNU6-486P-201ENST00000363116 107 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 RNU5E-7P-201ENST00000365290 117 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 RNU6-487P-201ENST00000365430 104 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 Y_RNA.378-201ENST00000365652 113 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 RNU6-301P-201ENST00000384277 107 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CCDC63Q8NA47 RNU2-52P-201ENST00000410680 190 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC63Q8NA47 OR9R1P-201ENST00000412200 877 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 SNORD56-201ENST00000413522 71 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 MTCO1P21-201ENST00000416634 589 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 AC074117.2-201ENST00000417130 397 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC63Q8NA47 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC63Q8NA47 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC63Q8NA47 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC63Q8NA47 MTND3P16-201ENST00000452205 344 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 AL441985.1-201ENST00000457727 251 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC63Q8NA47 AC096576.1-201ENST00000489014 359 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 AC018437.1-201ENST00000492214 406 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC63Q8NA47 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC63Q8NA47 RNA5SP320-201ENST00000516263 124 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 RPL7P20-201ENST00000520308 745 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 AP000889.2-201ENST00000532684 490 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC63Q8NA47 AL157687.1-201ENST00000554853 619 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 MIR5571-201ENST00000577998 113 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 ELOCP29-201ENST00000588193 334 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 VN1R80P-201ENST00000597126 338 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 AL162413.1-201ENST00000603198 110 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 AC067747.1-201ENST00000608026 250 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC63Q8NA47 MIR1321-201ENST00000637766 79 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 AC068137.3-201ENST00000639191 341 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 AC069528.2-201ENST00000624849 1991 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC63Q8NA47 AC073346.2-201ENST00000624724 2058 ntBASIC2.37□□□□□ -2.03
CCDC63Q8NA47 Y_RNA.38-201ENST00000362617 102 ntBASIC2.36□□□□□ -2.03
CCDC63Q8NA47 RNU6-451P-201ENST00000362921 107 ntBASIC2.36□□□□□ -2.03
CCDC63Q8NA47 RNU4-66P-201ENST00000365199 138 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms