Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 AC019159.1-201ENST00000605094 187 ntBASIC3.54□□□□□ -1.84
DTX3Q8N9I9 AL591424.2-201ENST00000617023 128 ntBASIC3.54□□□□□ -1.84
DTX3Q8N9I9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
DTX3Q8N9I9 MIR7703-201ENST00000620784 77 ntBASIC3.54□□□□□ -1.84
DTX3Q8N9I9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.54□□□□□ -1.84
DTX3Q8N9I9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
DTX3Q8N9I9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.54□□□□□ -1.84
DTX3Q8N9I9 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
DTX3Q8N9I9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
DTX3Q8N9I9 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
DTX3Q8N9I9 AC091152.2-201ENST00000591628 2569 ntBASIC3.54□□□□□ -1.84
DTX3Q8N9I9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
DTX3Q8N9I9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
DTX3Q8N9I9 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
DTX3Q8N9I9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
DTX3Q8N9I9 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
DTX3Q8N9I9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
DTX3Q8N9I9 RNU6-858P-201ENST00000362436 107 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 RNU6-1266P-201ENST00000362794 105 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 Y_RNA.65-201ENST00000362846 100 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 SNORD113-8-201ENST00000363497 74 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 SNORD35B-201ENST00000363660 87 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 RNA5SP366-201ENST00000365454 123 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 RNU6-926P-201ENST00000384075 107 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 Y_RNA.785-201ENST00000384290 109 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 Y_RNA.541-201ENST00000384640 113 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.53□□□□□ -1.84
DTX3Q8N9I9 PIGPP3-201ENST00000425307 415 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 RPS15AP7-201ENST00000439294 405 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 AC016700.2-201ENST00000446011 156 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 RPL21P104-201ENST00000464143 478 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 SNRPGP7-201ENST00000469016 106 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 AP000870.1-201ENST00000472927 406 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 AF186996.7-201ENST00000492781 209 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.53□□□□□ -1.84
DTX3Q8N9I9 RNU4-71P-201ENST00000516258 113 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 Y_RNA.700-201ENST00000516806 100 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 SCARNA24.2-201ENST00000516968 130 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 SNORA81.3-201ENST00000517283 198 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 IGLVIV-65-201ENST00000517313 360 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 AC022080.3-201ENST00000544433 482 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 RRN3P3-201ENST00000549207 578 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.53□□□□□ -1.84
DTX3Q8N9I9 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.53□□□□□ -1.84
DTX3Q8N9I9 BX284668.6-201ENST00000606899 438 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 AC083809.1-201ENST00000615051 472 ntBASIC3.53□□□□□ -1.84
DTX3Q8N9I9 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
DTX3Q8N9I9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
DTX3Q8N9I9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
DTX3Q8N9I9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
DTX3Q8N9I9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
DTX3Q8N9I9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
DTX3Q8N9I9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
DTX3Q8N9I9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
DTX3Q8N9I9 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
DTX3Q8N9I9 RNU1-18P-201ENST00000363062 164 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 RNU6-280P-201ENST00000364145 104 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 Y_RNA.277-201ENST00000364754 102 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 SNORD32A-201ENST00000364805 84 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 RNU6-1062P-201ENST00000383908 107 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 SNORA29-201ENST00000384183 140 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 RNU6-541P-201ENST00000384709 110 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 RNU4-61P-201ENST00000411243 107 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 YPEL5P1-201ENST00000419731 367 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.52□□□□□ -1.85
DTX3Q8N9I9 RPEP3-201ENST00000425462 676 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 AL157831.1-201ENST00000426134 473 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 EIF1P2-201ENST00000428233 350 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.52□□□□□ -1.85
DTX3Q8N9I9 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.52□□□□□ -1.85
DTX3Q8N9I9 AC083863.1-201ENST00000438811 231 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.52□□□□□ -1.85
DTX3Q8N9I9 RPL23AP81-201ENST00000455252 467 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 RN7SL132P-201ENST00000478131 296 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 RNU6-1114P-201ENST00000516022 107 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 RNA5SP519-201ENST00000516480 119 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 RNU7-143P-201ENST00000516781 65 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.52□□□□□ -1.85
DTX3Q8N9I9 AC120057.2-201ENST00000571520 271 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 AC130289.1-201ENST00000577321 73 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 AL356157.2-201ENST00000605122 111 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 BRDTP1-201ENST00000605735 677 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 AC011944.2-201ENST00000624440 683 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 MIR3653-201ENST00000625572 110 ntBASIC3.52□□□□□ -1.85
DTX3Q8N9I9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.52□□□□□ -1.85
DTX3Q8N9I9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
DTX3Q8N9I9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
DTX3Q8N9I9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.52□□□□□ -1.85
DTX3Q8N9I9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
DTX3Q8N9I9 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.51□□□□□ -1.85
DTX3Q8N9I9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.51□□□□□ -1.85
DTX3Q8N9I9 AC090740.1-201ENST00000623193 2262 ntBASIC3.51□□□□□ -1.85
DTX3Q8N9I9 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
DTX3Q8N9I9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
DTX3Q8N9I9 Y_RNA.462-201ENST00000384268 102 ntBASIC3.51□□□□□ -1.85
DTX3Q8N9I9 RNU1-139P-201ENST00000391307 165 ntBASIC3.51□□□□□ -1.85
DTX3Q8N9I9 HMGN2P8-201ENST00000391458 268 ntBASIC3.51□□□□□ -1.85
DTX3Q8N9I9 FTH1P15-201ENST00000406984 280 ntBASIC3.51□□□□□ -1.85
DTX3Q8N9I9 MTHFD2P2-201ENST00000407725 247 ntBASIC3.51□□□□□ -1.85
DTX3Q8N9I9 RNU2-14P-201ENST00000411053 191 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms