Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 RN7SKP104-201ENST00000362605 328 ntBASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 RNU1-20P-201ENST00000363314 162 ntBASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 RNU6-81P-201ENST00000365608 104 ntBASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 HDGFP1-201ENST00000405943 252 ntBASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 AC016397.1-201ENST00000412463 242 ntBASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 EIF4A1P12-201ENST00000551910 141 ntBASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 AC009127.3-201ENST00000570531 403 ntBASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 MIR4330-201ENST00000579077 105 ntBASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 MIR3934-201ENST00000579806 107 ntBASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 MIR4697-201ENST00000582977 78 ntBASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 MTND1P7-201ENST00000632801 297 ntBASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 AL034408.1-202ENST00000636088 415 ntBASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
DEPDC4Q8N2C3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 Y_RNA.8-201ENST00000362353 102 ntBASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 SNORD114-19-201ENST00000363072 75 ntBASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 Y_RNA.121-201ENST00000363309 113 ntBASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 Y_RNA.398-201ENST00000383952 99 ntBASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 Y_RNA.571-201ENST00000384753 98 ntBASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 MIR921-201ENST00000401133 56 ntBASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 U3.39-201ENST00000408569 239 ntBASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 BMS1P22-201ENST00000414726 313 ntBASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 AIMP1P2-201ENST00000425294 312 ntBASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 AC010099.1-201ENST00000455434 375 ntBASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 COX6B1P5-201ENST00000509843 249 ntBASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 RNU6-346P-201ENST00000516288 111 ntBASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 AC025946.2-201ENST00000603398 234 ntBASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 FAM25E-202ENST00000608562 189 ntBASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 AL008718.3-201ENST00000610217 321 ntBASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 AC104465.1-201ENST00000611365 139 ntBASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 AL078604.3-201ENST00000615580 211 ntBASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 AC091953.3-201ENST00000623220 236 ntBASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
DEPDC4Q8N2C3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 RNU6-529P-201ENST00000363383 104 ntBASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 RNU6-727P-201ENST00000363592 107 ntBASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 RNU6-198P-201ENST00000384258 104 ntBASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 MIR549A-201ENST00000385268 96 ntBASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 SNORA11-201ENST00000408789 128 ntBASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 BTF3P11-201ENST00000426582 477 ntBASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 RN7SL132P-201ENST00000478131 296 ntBASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 RNU6-709P-201ENST00000517257 104 ntBASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 TGIF1P1-201ENST00000558095 802 ntBASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 IPO5P1-202ENST00000600039 287 ntBASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 SNORD11B-201ENST00000607707 90 ntBASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 TCL6_2.1-201ENST00000615162 119 ntBASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 AC010889.1-201ENST00000566193 2666 ntBASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
DEPDC4Q8N2C3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 Y_RNA.7-201ENST00000362352 102 ntBASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 Y_RNA.40-201ENST00000362645 93 ntBASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 RNU6-312P-201ENST00000364629 107 ntBASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 BX284632.1-201ENST00000478218 541 ntBASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 RN7SL319P-201ENST00000480656 221 ntBASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 AC005840.1-201ENST00000498412 377 ntBASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 AC140172.1-201ENST00000502928 141 ntBASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 SUMO2P18-201ENST00000518873 252 ntBASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.42□□□□□ -1.7
DEPDC4Q8N2C3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms