Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC004832.5-201ENST00000608677 401 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HERC6Q8IVU3 MIR6817-201ENST00000615588 66 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RMST_7.1-201ENST00000621935 268 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 MIR7843-201ENST00000622274 79 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
HERC6Q8IVU3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
HERC6Q8IVU3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
HERC6Q8IVU3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.05□□□□□ -1.92
HERC6Q8IVU3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.05□□□□□ -1.92
HERC6Q8IVU3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.05□□□□□ -1.92
HERC6Q8IVU3 RNA5SP68-201ENST00000363885 119 ntBASIC3.05□□□□□ -1.92
HERC6Q8IVU3 RNA5SP344-201ENST00000411081 104 ntBASIC3.05□□□□□ -1.92
HERC6Q8IVU3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.05□□□□□ -1.92
HERC6Q8IVU3 BMS1P22-201ENST00000414726 313 ntBASIC3.05□□□□□ -1.92
HERC6Q8IVU3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.05□□□□□ -1.92
HERC6Q8IVU3 AL513477.1-202ENST00000417061 214 ntBASIC3.05□□□□□ -1.92
HERC6Q8IVU3 RPL30P16-201ENST00000419341 429 ntBASIC3.05□□□□□ -1.92
HERC6Q8IVU3 AL591043.1-201ENST00000432461 424 ntBASIC3.05□□□□□ -1.92
HERC6Q8IVU3 RPS3P1-201ENST00000456781 192 ntBASIC3.05□□□□□ -1.92
HERC6Q8IVU3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.05□□□□□ -1.92
HERC6Q8IVU3 RPL31P58-201ENST00000469001 379 ntBASIC3.05□□□□□ -1.92
HERC6Q8IVU3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.05□□□□□ -1.92
HERC6Q8IVU3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.05□□□□□ -1.92
HERC6Q8IVU3 RPL23AP49-201ENST00000492925 468 ntBASIC3.05□□□□□ -1.92
HERC6Q8IVU3 PRDX4P1-201ENST00000507189 574 ntBASIC3.05□□□□□ -1.92
HERC6Q8IVU3 RNA5SP24-201ENST00000516478 95 ntBASIC3.05□□□□□ -1.92
HERC6Q8IVU3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.05□□□□□ -1.92
HERC6Q8IVU3 GLYCAM1-201ENST00000546596 285 ntBASIC3.05□□□□□ -1.92
HERC6Q8IVU3 AL118558.2-201ENST00000556294 238 ntBASIC3.05□□□□□ -1.92
HERC6Q8IVU3 APOOP1-201ENST00000604695 592 ntBASIC3.05□□□□□ -1.92
HERC6Q8IVU3 RNU6-85P-201ENST00000605989 107 ntBASIC3.05□□□□□ -1.92
HERC6Q8IVU3 AL357078.3-201ENST00000607528 618 ntBASIC3.05□□□□□ -1.92
HERC6Q8IVU3 AL020991.1-201ENST00000612314 373 ntBASIC3.05□□□□□ -1.92
HERC6Q8IVU3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
HERC6Q8IVU3 AC010329.5-201ENST00000623497 2174 ntBASIC3.04□□□□□ -1.92
HERC6Q8IVU3 RNU6-942P-201ENST00000363002 107 ntBASIC3.04□□□□□ -1.92
HERC6Q8IVU3 RNU6-527P-201ENST00000363425 104 ntBASIC3.04□□□□□ -1.92
HERC6Q8IVU3 SNORD116-20-201ENST00000384529 92 ntBASIC3.04□□□□□ -1.92
HERC6Q8IVU3 Y_RNA.530-201ENST00000384587 101 ntBASIC3.04□□□□□ -1.92
HERC6Q8IVU3 SNORA67.4-201ENST00000384688 142 ntBASIC3.04□□□□□ -1.92
HERC6Q8IVU3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HERC6Q8IVU3 RNA5SP21-201ENST00000410917 96 ntBASIC3.04□□□□□ -1.92
HERC6Q8IVU3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.04□□□□□ -1.92
HERC6Q8IVU3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HERC6Q8IVU3 RN7SL633P-201ENST00000488974 297 ntBASIC3.04□□□□□ -1.92
HERC6Q8IVU3 TRBVA-201ENST00000498804 316 ntBASIC3.04□□□□□ -1.92
HERC6Q8IVU3 RN7SKP282-201ENST00000516824 299 ntBASIC3.04□□□□□ -1.92
HERC6Q8IVU3 SNORA31.18-201ENST00000517043 134 ntBASIC3.04□□□□□ -1.92
HERC6Q8IVU3 RNU6-323P-201ENST00000521915 107 ntBASIC3.04□□□□□ -1.92
HERC6Q8IVU3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.04□□□□□ -1.92
HERC6Q8IVU3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.04□□□□□ -1.92
HERC6Q8IVU3 RMST_3.1-201ENST00000611651 109 ntBASIC3.04□□□□□ -1.92
HERC6Q8IVU3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
HERC6Q8IVU3 AC093913.1-201ENST00000614178 329 ntBASIC3.04□□□□□ -1.92
HERC6Q8IVU3 AC010378.1-201ENST00000619270 362 ntBASIC3.04□□□□□ -1.92
HERC6Q8IVU3 DUXAP9-208ENST00000622815 614 ntBASIC3.04□□□□□ -1.92
HERC6Q8IVU3 AC092608.2-201ENST00000624427 218 ntBASIC3.04□□□□□ -1.92
HERC6Q8IVU3 AC064859.1-201ENST00000624741 174 ntBASIC3.04□□□□□ -1.92
HERC6Q8IVU3 MIR7515-201ENST00000637837 67 ntBASIC3.04□□□□□ -1.92
HERC6Q8IVU3 AC099654.14-201ENST00000638599 341 ntBASIC3.04□□□□□ -1.92
HERC6Q8IVU3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.04□□□□□ -1.92
HERC6Q8IVU3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.04□□□□□ -1.92
HERC6Q8IVU3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.03□□□□□ -1.92
HERC6Q8IVU3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HERC6Q8IVU3 RNU6-78P-201ENST00000362897 107 ntBASIC3.03□□□□□ -1.92
HERC6Q8IVU3 SNORD113-7-201ENST00000363762 77 ntBASIC3.03□□□□□ -1.92
HERC6Q8IVU3 SNORA68.1-201ENST00000364537 132 ntBASIC3.03□□□□□ -1.92
HERC6Q8IVU3 RNU6-843P-201ENST00000384454 104 ntBASIC3.03□□□□□ -1.92
HERC6Q8IVU3 RNU6-1245P-201ENST00000411130 106 ntBASIC3.03□□□□□ -1.92
HERC6Q8IVU3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.03□□□□□ -1.92
HERC6Q8IVU3 USP9YP20-201ENST00000419224 558 ntBASIC3.03□□□□□ -1.92
HERC6Q8IVU3 NDUFA5P4-201ENST00000436704 385 ntBASIC3.03□□□□□ -1.92
HERC6Q8IVU3 FABP5P14-201ENST00000437273 393 ntBASIC3.03□□□□□ -1.92
HERC6Q8IVU3 AL590639.1-201ENST00000456484 337 ntBASIC3.03□□□□□ -1.92
HERC6Q8IVU3 Y_RNA.638-201ENST00000459374 113 ntBASIC3.03□□□□□ -1.92
HERC6Q8IVU3 HMGN2P26-201ENST00000463169 339 ntBASIC3.03□□□□□ -1.92
HERC6Q8IVU3 RPL23AP45-201ENST00000476406 468 ntBASIC3.03□□□□□ -1.92
HERC6Q8IVU3 AC098799.2-201ENST00000509466 868 ntBASIC3.03□□□□□ -1.92
HERC6Q8IVU3 RN7SKP43-201ENST00000516173 320 ntBASIC3.03□□□□□ -1.92
HERC6Q8IVU3 RNU6-358P-201ENST00000516564 75 ntBASIC3.03□□□□□ -1.92
HERC6Q8IVU3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.03□□□□□ -1.92
HERC6Q8IVU3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.03□□□□□ -1.92
HERC6Q8IVU3 COX6CP5-201ENST00000527162 228 ntBASIC3.03□□□□□ -1.92
HERC6Q8IVU3 SNORD53-201ENST00000579969 78 ntBASIC3.03□□□□□ -1.92
HERC6Q8IVU3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.03□□□□□ -1.92
HERC6Q8IVU3 MIR4765-201ENST00000585007 77 ntBASIC3.03□□□□□ -1.92
HERC6Q8IVU3 U4.7-201ENST00000638126 106 ntBASIC3.03□□□□□ -1.92
HERC6Q8IVU3 AL359854.1-201ENST00000614203 1594 ntBASIC3.03□□□□□ -1.92
HERC6Q8IVU3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HERC6Q8IVU3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.03□□□□□ -1.92
HERC6Q8IVU3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HERC6Q8IVU3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
HERC6Q8IVU3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.02□□□□□ -1.93
HERC6Q8IVU3 RNU6-487P-201ENST00000365430 104 ntBASIC3.02□□□□□ -1.93
HERC6Q8IVU3 RNU6-214P-201ENST00000384130 107 ntBASIC3.02□□□□□ -1.93
HERC6Q8IVU3 FGF7P8-201ENST00000402994 292 ntBASIC3.02□□□□□ -1.93
HERC6Q8IVU3 Y_RNA.615-201ENST00000410769 117 ntBASIC3.02□□□□□ -1.93
HERC6Q8IVU3 SNORD56-201ENST00000413522 71 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms