Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC010469.2-201ENST00000496412 480 ntBASIC3.36□□□□□ -1.87
VRK3Q8IV63 AC026784.1-201ENST00000507986 352 ntBASIC3.36□□□□□ -1.87
VRK3Q8IV63 AC110768.1-201ENST00000509222 400 ntBASIC3.36□□□□□ -1.87
VRK3Q8IV63 AL442163.3-201ENST00000554110 156 ntBASIC3.36□□□□□ -1.87
VRK3Q8IV63 AMZ2P1-203ENST00000565833 850 ntBASIC3.36□□□□□ -1.87
VRK3Q8IV63 MIR4444-1-201ENST00000581696 74 ntBASIC3.36□□□□□ -1.87
VRK3Q8IV63 MIR4444-2-201ENST00000584390 74 ntBASIC3.36□□□□□ -1.87
VRK3Q8IV63 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.36□□□□□ -1.87
VRK3Q8IV63 U3.45-201ENST00000607547 219 ntBASIC3.36□□□□□ -1.87
VRK3Q8IV63 AC004852.3-201ENST00000614131 326 ntBASIC3.36□□□□□ -1.87
VRK3Q8IV63 AC004792.1-201ENST00000614523 137 ntBASIC3.36□□□□□ -1.87
VRK3Q8IV63 AC092628.2-201ENST00000622492 339 ntBASIC3.36□□□□□ -1.87
VRK3Q8IV63 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VRK3Q8IV63 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VRK3Q8IV63 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VRK3Q8IV63 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.35□□□□□ -1.87
VRK3Q8IV63 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VRK3Q8IV63 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VRK3Q8IV63 SNORA71.3-201ENST00000362582 128 ntBASIC3.35□□□□□ -1.87
VRK3Q8IV63 SNORD81.1-201ENST00000363064 77 ntBASIC3.35□□□□□ -1.87
VRK3Q8IV63 SNORD27-201ENST00000363981 72 ntBASIC3.35□□□□□ -1.87
VRK3Q8IV63 SNORD14B-201ENST00000364533 90 ntBASIC3.35□□□□□ -1.87
VRK3Q8IV63 MIR215-201ENST00000384858 110 ntBASIC3.35□□□□□ -1.87
VRK3Q8IV63 MIR124-3-201ENST00000384866 87 ntBASIC3.35□□□□□ -1.87
VRK3Q8IV63 MIR514A1-201ENST00000385133 98 ntBASIC3.35□□□□□ -1.87
VRK3Q8IV63 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
VRK3Q8IV63 MIR190B-201ENST00000401119 79 ntBASIC3.35□□□□□ -1.87
VRK3Q8IV63 MRPL35P1-201ENST00000404272 572 ntBASIC3.35□□□□□ -1.87
VRK3Q8IV63 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.35□□□□□ -1.87
VRK3Q8IV63 AC093578.1-201ENST00000415219 368 ntBASIC3.35□□□□□ -1.87
VRK3Q8IV63 HMGB3P8-201ENST00000449709 577 ntBASIC3.35□□□□□ -1.87
VRK3Q8IV63 RPS4XP2-201ENST00000458402 793 ntBASIC3.35□□□□□ -1.87
VRK3Q8IV63 RN7SKP210-201ENST00000459176 261 ntBASIC3.35□□□□□ -1.87
VRK3Q8IV63 RPS29P27-201ENST00000463711 170 ntBASIC3.35□□□□□ -1.87
VRK3Q8IV63 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.35□□□□□ -1.87
VRK3Q8IV63 SNORA70.19-201ENST00000516717 90 ntBASIC3.35□□□□□ -1.87
VRK3Q8IV63 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.35□□□□□ -1.87
VRK3Q8IV63 AL590705.4-201ENST00000532209 134 ntBASIC3.35□□□□□ -1.87
VRK3Q8IV63 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.35□□□□□ -1.87
VRK3Q8IV63 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.35□□□□□ -1.87
VRK3Q8IV63 AC104581.2-201ENST00000572227 430 ntBASIC3.35□□□□□ -1.87
VRK3Q8IV63 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.35□□□□□ -1.87
VRK3Q8IV63 AC005046.1-201ENST00000608515 625 ntBASIC3.35□□□□□ -1.87
VRK3Q8IV63 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VRK3Q8IV63 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VRK3Q8IV63 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.35□□□□□ -1.87
VRK3Q8IV63 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.35□□□□□ -1.87
VRK3Q8IV63 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.35□□□□□ -1.87
VRK3Q8IV63 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
VRK3Q8IV63 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VRK3Q8IV63 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
VRK3Q8IV63 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.34□□□□□ -1.87
VRK3Q8IV63 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
VRK3Q8IV63 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
VRK3Q8IV63 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.34□□□□□ -1.87
VRK3Q8IV63 AL356274.2-201ENST00000624379 3752 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VRK3Q8IV63 AL391987.6-201ENST00000305671 199 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 MIR30E-201ENST00000362104 92 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 Y_RNA.274-201ENST00000364714 101 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 U3.15-201ENST00000365398 212 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 RNU6-886P-201ENST00000384319 105 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
VRK3Q8IV63 RPS29P13-201ENST00000402041 169 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.34□□□□□ -1.87
VRK3Q8IV63 Z85995.1-201ENST00000415547 335 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 AC091390.3-201ENST00000426478 338 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.34□□□□□ -1.87
VRK3Q8IV63 AP000907.1-201ENST00000428428 510 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 PRELID3BP1-201ENST00000457142 540 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.34□□□□□ -1.87
VRK3Q8IV63 AC008155.2-201ENST00000464337 397 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.34□□□□□ -1.87
VRK3Q8IV63 RN7SL330P-201ENST00000469709 307 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 RN7SL293P-201ENST00000481765 281 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 AC087190.1-201ENST00000484462 480 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 AC107032.1-201ENST00000485945 480 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.34□□□□□ -1.87
VRK3Q8IV63 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.34□□□□□ -1.87
VRK3Q8IV63 RNU4-71P-201ENST00000516258 113 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 MIR2276-201ENST00000516886 89 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 Y_RNA.713-201ENST00000517013 96 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.34□□□□□ -1.87
VRK3Q8IV63 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.34□□□□□ -1.87
VRK3Q8IV63 AC005476.1-201ENST00000554427 397 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 AC136932.1-201ENST00000574771 208 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.34□□□□□ -1.87
VRK3Q8IV63 SRGNP1-201ENST00000603392 451 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 RNA5SP108-201ENST00000605921 117 ntBASIC3.34□□□□□ -1.87
VRK3Q8IV63 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.34□□□□□ -1.87
VRK3Q8IV63 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.34□□□□□ -1.87
VRK3Q8IV63 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
VRK3Q8IV63 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
VRK3Q8IV63 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
VRK3Q8IV63 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.34□□□□□ -1.88
VRK3Q8IV63 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
VRK3Q8IV63 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VRK3Q8IV63 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.33□□□□□ -1.88
VRK3Q8IV63 DEFB108F-201ENST00000344638 222 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 RNA5SP119-201ENST00000362715 117 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms