Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 SNORA43.4-201ENST00000629559 138 ntBASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RNF111Q6ZNA4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RNF111Q6ZNA4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 AC006504.1-201ENST00000562493 3666 ntBASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 SNORA60-201ENST00000362396 134 ntBASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 RNU6-884P-201ENST00000363889 107 ntBASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 Y_RNA.319-201ENST00000365138 92 ntBASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 RNU6-21P-201ENST00000384710 107 ntBASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 Y_RNA.569-201ENST00000384749 103 ntBASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 Y_RNA.626-201ENST00000411288 95 ntBASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 AC096638.1-201ENST00000444678 216 ntBASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 AC078918.1-201ENST00000498515 228 ntBASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 SNORD116-28-201ENST00000516123 91 ntBASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 AC027288.2-201ENST00000553028 243 ntBASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 AC025884.1-201ENST00000556034 378 ntBASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 UBL5P4-201ENST00000562584 236 ntBASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 MIR3910-1-201ENST00000580936 111 ntBASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 AC037487.3-201ENST00000606668 112 ntBASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 MIR492-201ENST00000638676 116 ntBASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 AC135776.4-201ENST00000624300 1904 ntBASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 AC008725.1-201ENST00000605123 2263 ntBASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
RNF111Q6ZNA4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 ZNF826P-207ENST00000622273 1910 ntBASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 RNU6-858P-201ENST00000362436 107 ntBASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 SNORD35B-201ENST00000363660 87 ntBASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 RNU6-326P-201ENST00000365480 107 ntBASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 RNU6-142P-201ENST00000384019 107 ntBASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 MTCO2P33-201ENST00000402100 465 ntBASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 RNU6-651P-201ENST00000411040 105 ntBASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 RPL26P27-201ENST00000414397 437 ntBASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 AC002075.2-201ENST00000425207 252 ntBASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 RPL37P4-201ENST00000448908 268 ntBASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 AC073901.1-201ENST00000462471 408 ntBASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 AC078817.1-201ENST00000492623 435 ntBASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 AC108043.1-201ENST00000512696 574 ntBASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 RNU6-1282P-201ENST00000516735 96 ntBASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 RN7SL600P-201ENST00000581811 299 ntBASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 MIR5684-201ENST00000585074 65 ntBASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 AL591034.3-201ENST00000605511 685 ntBASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF111Q6ZNA4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 RNU6-682P-201ENST00000363843 106 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 RNU1-100P-201ENST00000365255 165 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 AL133412.1-201ENST00000380194 2992 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 U8.10-201ENST00000384260 133 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 MIR10B-201ENST00000385011 110 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 PPIAP31-201ENST00000405422 495 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 RNU5A-5P-201ENST00000411054 116 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 RNU6-1001P-201ENST00000411265 100 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 HSPE1P12-201ENST00000412576 301 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 AC125238.1-201ENST00000448842 249 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 RPL26P26-201ENST00000480251 434 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 AC074198.2-201ENST00000508153 258 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 RN7SKP49-201ENST00000516675 260 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 RNU6-861P-201ENST00000516745 106 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 Y_RNA.703-201ENST00000516846 111 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 AC025627.2-201ENST00000576220 160 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 AL162424.1-201ENST00000602325 221 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 AC019159.1-201ENST00000605094 187 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 MIR7151-201ENST00000617477 60 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 AC112484.5-201ENST00000624189 228 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
RNF111Q6ZNA4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 SRP72P2-201ENST00000344851 1979 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 SNORA25.1-201ENST00000362326 128 ntBASIC3.8□□□□□ -1.8
RNF111Q6ZNA4 RNU5B-2P-201ENST00000363036 113 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms