Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 RNU6-212P-201ENST00000362642 104 ntBASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 Y_RNA.132-201ENST00000363421 102 ntBASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 SNORD32A-201ENST00000364805 84 ntBASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 Y_RNA.504-201ENST00000384481 104 ntBASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 SNORA75.6-201ENST00000391318 127 ntBASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 AL591034.2-201ENST00000402839 359 ntBASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 RNA5SP390-201ENST00000410191 113 ntBASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 RPL36AP48-201ENST00000485521 314 ntBASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 CKS1BP7-201ENST00000522230 235 ntBASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 AC105137.2-201ENST00000569073 466 ntBASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 AL080274.1-201ENST00000605565 220 ntBASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 Z83843.1-201ENST00000604070 3685 ntBASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
TMEM88Q6PEY1 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 RNU6-529P-201ENST00000363383 104 ntBASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 RNU6-596P-201ENST00000365395 98 ntBASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 RNU6-487P-201ENST00000365430 104 ntBASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 RNU6-1040P-201ENST00000383974 107 ntBASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 RNU6-1011P-201ENST00000384668 107 ntBASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 RNU6-308P-201ENST00000390957 107 ntBASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 AC243428.1-201ENST00000421099 264 ntBASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 AC079354.2-201ENST00000453523 154 ntBASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 AC022447.4-201ENST00000504053 364 ntBASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 AC007375.1-201ENST00000554513 578 ntBASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 AC009318.2-201ENST00000610917 651 ntBASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.81□□□□□ -1.96
TMEM88Q6PEY1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 SNORD114-19-201ENST00000363072 75 ntBASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 SNORA51.4-201ENST00000364993 124 ntBASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 SNORD21-201ENST00000383953 95 ntBASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 RNU6-784P-201ENST00000384330 106 ntBASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 RNU6-1222P-201ENST00000384615 107 ntBASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 U3.26-201ENST00000391236 204 ntBASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 BMS1P22-201ENST00000414726 313 ntBASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 AC104332.2-201ENST00000429959 156 ntBASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 TBCAP1-201ENST00000436520 327 ntBASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 CENPBD1P1-201ENST00000464061 469 ntBASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 RPS26P21-201ENST00000475397 348 ntBASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 RNU6-470P-201ENST00000515954 104 ntBASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 SNORA31.26-201ENST00000517250 137 ntBASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 RN7SL703P-201ENST00000578485 302 ntBASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 AC005899.2-201ENST00000584353 90 ntBASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 MIR4765-201ENST00000585007 77 ntBASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 AC005014.2-201ENST00000607795 599 ntBASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 MIR7515-201ENST00000637837 67 ntBASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 AL109809.4-201ENST00000603520 2185 ntBASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 AL049781.1-201ENST00000623195 3585 ntBASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
TMEM88Q6PEY1 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 Y_RNA.40-201ENST00000362645 93 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 RNA5SP97-201ENST00000365006 84 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 SNORD42.2-201ENST00000365570 69 ntBASIC2.79□□□□□ -1.96
TMEM88Q6PEY1 Y_RNA.445-201ENST00000384168 102 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms