Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC034102.8-201ENST00000615146 484 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 MIR8057-201ENST00000620957 69 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 AC021753.1-201ENST00000635724 168 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 LINC02471-203ENST00000641941 4752 ntBASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNKSR3Q6P9H4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 RNU4-35P-201ENST00000362588 141 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 U3.6-201ENST00000363622 211 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 Y_RNA.170-201ENST00000363746 110 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 Y_RNA.358-201ENST00000365491 99 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-827P-201ENST00000365553 106 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 MIR128-1-201ENST00000384921 82 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 HSPE1P26-201ENST00000405341 275 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 SNORD56-201ENST00000413522 71 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 AC017079.2-201ENST00000416102 485 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 TMEM167AP1-201ENST00000423409 219 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 BX679664.1-201ENST00000434429 253 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 U8.22-201ENST00000459141 133 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 RPS4XP13-201ENST00000483219 789 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-861P-201ENST00000516745 106 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 RNA5SP471-201ENST00000516971 106 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-1315P-201ENST00000517187 99 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 AC010186.2-204ENST00000537668 439 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 MIR3921-201ENST00000577308 85 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 YPEL5P2-201ENST00000605553 359 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 U2.14-201ENST00000615943 113 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 AC243829.7-201ENST00000633081 225 ntBASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CNKSR3Q6P9H4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 AC090740.1-201ENST00000623193 2262 ntBASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 AL133383.2-201ENST00000622958 2336 ntBASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 UBE2L2-201ENST00000254302 429 ntBASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 RNA5SP52-201ENST00000362448 134 ntBASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 U3.13-201ENST00000364804 214 ntBASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 SNORA36C-201ENST00000384289 132 ntBASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-102P-201ENST00000384485 104 ntBASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 MIR190B-201ENST00000401119 79 ntBASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 AL592148.1-201ENST00000413568 445 ntBASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 RPL27AP8-201ENST00000424277 446 ntBASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 AC017083.1-201ENST00000428093 483 ntBASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 AL445305.1-201ENST00000432577 575 ntBASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 AC025518.1-201ENST00000479856 347 ntBASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 AL590705.4-201ENST00000532209 134 ntBASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 MIR1273C-201ENST00000578669 77 ntBASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 MIR548AI-201ENST00000579940 88 ntBASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 SCARNA15.3-201ENST00000626315 122 ntBASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 SCARNA4.1-201ENST00000628597 123 ntBASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CNKSR3Q6P9H4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 RNU6-512P-201ENST00000364438 103 ntBASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 RNY3P4-201ENST00000384428 101 ntBASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 AL079342.1-201ENST00000401460 267 ntBASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 MIR1290-201ENST00000408735 78 ntBASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 Y_RNA.602-201ENST00000410535 92 ntBASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 DBIP2-201ENST00000419076 262 ntBASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.91□□□□□ -1.78
CNKSR3Q6P9H4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms