Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 MTND5P6-201ENST00000422338 1798 ntBASIC1.95□□□□□ -2.1
NIPAL3Q6P499 RNU6-1159P-201ENST00000362933 107 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 U3.13-201ENST00000364804 214 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 SNORA40.19-201ENST00000390846 128 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 RNA5SP338-201ENST00000410495 85 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.94□□□□□ -2.1
NIPAL3Q6P499 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
NIPAL3Q6P499 AL135786.1-201ENST00000415892 214 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 MTND1P18-201ENST00000448191 573 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 RPL23AP7-203ENST00000449021 469 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.94□□□□□ -2.1
NIPAL3Q6P499 AC025033.1-201ENST00000463883 194 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 AC006512.1-201ENST00000468816 291 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.94□□□□□ -2.1
NIPAL3Q6P499 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
NIPAL3Q6P499 RNA5SP200-201ENST00000516360 103 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 AP001893.2-201ENST00000526949 202 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 AP003392.2-201ENST00000527269 208 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 AP002963.1-201ENST00000530590 184 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.94□□□□□ -2.1
NIPAL3Q6P499 SNRPGP18-201ENST00000553000 214 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.94□□□□□ -2.1
NIPAL3Q6P499 AC068790.2-201ENST00000602601 557 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 AL136363.2-201ENST00000604173 851 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 Z82243.1-201ENST00000609432 473 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.94□□□□□ -2.1
NIPAL3Q6P499 AC073114.1-201ENST00000612027 490 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 AC009161.2-201ENST00000624626 138 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 AC064859.1-201ENST00000624741 174 ntBASIC1.94□□□□□ -2.1
NIPAL3Q6P499 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
NIPAL3Q6P499 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
NIPAL3Q6P499 snoU2_19.1-201ENST00000362361 80 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NIPAL3Q6P499 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
NIPAL3Q6P499 SNORA48.3-201ENST00000391081 134 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NIPAL3Q6P499 SNORA11.4-201ENST00000408823 129 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 RNU6-1245P-201ENST00000411130 106 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 Z98742.3-201ENST00000418637 326 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 AL669831.1-202ENST00000428504 417 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 AL356320.1-201ENST00000429616 163 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NIPAL3Q6P499 GTF2IP13-201ENST00000438487 386 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.93□□□□□ -2.1
NIPAL3Q6P499 AC007969.2-201ENST00000441891 191 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 AL021397.1-201ENST00000451806 248 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 RPS27AP8-201ENST00000452665 445 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 RPS27P21-201ENST00000486977 252 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 RPL30P1-201ENST00000488676 339 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 MTND2P33-201ENST00000506452 1031 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 RPL23AP94-201ENST00000512518 302 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 MIR4703-201ENST00000577728 79 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 MIR3913-1-201ENST00000577744 102 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 AC091135.1-201ENST00000585943 307 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.93□□□□□ -2.1
NIPAL3Q6P499 AL590229.1-201ENST00000603497 542 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 AC121247.2-201ENST00000604776 136 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 AC109347.2-201ENST00000610220 349 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 AC004908.3-201ENST00000610248 625 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
NIPAL3Q6P499 AL159153.1-201ENST00000619688 317 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 AC097372.5-201ENST00000623665 376 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 U4.7-201ENST00000638126 106 ntBASIC1.93□□□□□ -2.1
NIPAL3Q6P499 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.92□□□□□ -2.1
NIPAL3Q6P499 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NIPAL3Q6P499 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.92□□□□□ -2.1
NIPAL3Q6P499 RNU6-37P-201ENST00000362692 107 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 RNU6-11P-201ENST00000364234 107 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 RNU6-1303P-201ENST00000364841 107 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 RNU6-25P-201ENST00000383873 107 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 RNU6-1-201ENST00000383898 107 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 RNU6-48P-201ENST00000384161 107 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 RNU6-36P-201ENST00000384172 107 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 RNU6-4P-201ENST00000384205 107 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 RNU6-5P-201ENST00000384238 107 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 RNU6-3P-201ENST00000384314 107 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 RNU6-16P-201ENST00000384385 107 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 RNU6-15P-201ENST00000384534 107 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 RNU6-2-201ENST00000384627 107 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 RNU6-29P-201ENST00000384637 107 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 RNU6-9-201ENST00000384776 107 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 RNU6-33P-201ENST00000384793 107 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 MIR544A-201ENST00000384855 91 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 U3.40-201ENST00000408706 208 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.92□□□□□ -2.1
NIPAL3Q6P499 HMGB3P2-201ENST00000411913 584 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.92□□□□□ -2.1
NIPAL3Q6P499 AL590556.1-201ENST00000423231 483 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 USP9YP18-201ENST00000425912 695 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 DNAJC19P4-201ENST00000440115 345 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 AL353705.4-201ENST00000449661 238 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 AL118520.1-201ENST00000450770 291 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 AL353752.1-201ENST00000454946 260 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.92□□□□□ -2.1
NIPAL3Q6P499 MTCO3P7-201ENST00000510008 774 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.92□□□□□ -2.1
NIPAL3Q6P499 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.92□□□□□ -2.1
NIPAL3Q6P499 LRRC34P2-201ENST00000514850 553 ntBASIC1.92□□□□□ -2.1
NIPAL3Q6P499 SCARNA16.3-201ENST00000516595 184 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms