Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 AL159987.2-201ENST00000432754 307 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 HMGN2P21-201ENST00000447764 270 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 NDUFB1P2-201ENST00000449477 176 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 RNU6-953P-201ENST00000459154 107 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 AC010469.2-201ENST00000496412 480 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.58□□□□□ -2
GFI1BQ5VTD9 AC034114.1-201ENST00000520293 285 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.58□□□□□ -2
GFI1BQ5VTD9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.58□□□□□ -2
GFI1BQ5VTD9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.58□□□□□ -2
GFI1BQ5VTD9 AC136932.1-201ENST00000574771 208 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 MIR4273-201ENST00000582824 84 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 RNA5SP108-201ENST00000605921 117 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 AC112200.1-201ENST00000625015 234 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.58□□□□□ -2
GFI1BQ5VTD9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.58□□□□□ -2
GFI1BQ5VTD9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
GFI1BQ5VTD9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.57□□□□□ -2
GFI1BQ5VTD9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
GFI1BQ5VTD9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
GFI1BQ5VTD9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.57□□□□□ -2
GFI1BQ5VTD9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.57□□□□□ -2
GFI1BQ5VTD9 AC009812.4-201ENST00000569134 1805 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 UBE2L2-201ENST00000254302 429 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.57□□□□□ -2
GFI1BQ5VTD9 Y_RNA.16-201ENST00000362421 102 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 SNORD50.1-201ENST00000362987 71 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 Y_RNA.416-201ENST00000384014 113 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 RNU6-187P-201ENST00000384139 106 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 RNU6-611P-201ENST00000384276 104 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 Y_RNA.785-201ENST00000384290 109 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 RNU6-1179P-201ENST00000384667 107 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 Y_RNA.555-201ENST00000384673 110 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 MIR181B1-201ENST00000385240 110 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 MTCO2P33-201ENST00000402100 465 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 MIR548M-201ENST00000408260 86 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 Y_RNA.592-201ENST00000410274 109 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 RNA5SP494-201ENST00000410653 129 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.57□□□□□ -2
GFI1BQ5VTD9 RPL32P35-201ENST00000415214 394 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 EI24P1-201ENST00000416584 867 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 DBIP2-201ENST00000419076 262 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 MYL8P-204ENST00000431574 518 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 MTCO3P29-201ENST00000432119 779 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.57□□□□□ -2
GFI1BQ5VTD9 AL590399.6-201ENST00000446396 307 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 PRELID3BP1-201ENST00000457142 540 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 SNORD105B-201ENST00000458770 79 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 RPL37P6-201ENST00000460682 294 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.57□□□□□ -2
GFI1BQ5VTD9 RPL31P60-201ENST00000478450 367 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 APOOP4-201ENST00000513530 597 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 RN7SKP18-201ENST00000516005 275 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 SNORA40.15-201ENST00000516884 107 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.57□□□□□ -2
GFI1BQ5VTD9 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.57□□□□□ -2
GFI1BQ5VTD9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.57□□□□□ -2
GFI1BQ5VTD9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.57□□□□□ -2
GFI1BQ5VTD9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.57□□□□□ -2
GFI1BQ5VTD9 MIR5696-201ENST00000578474 85 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 MIR5692A1-201ENST00000580523 69 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 AL355812.1-201ENST00000603215 216 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 RMST_4.1-201ENST00000616886 107 ntBASIC2.57□□□□□ -2
GFI1BQ5VTD9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
GFI1BQ5VTD9 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
GFI1BQ5VTD9 MFSD8-233ENST00000641482 4860 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNA5SP295-201ENST00000362655 121 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNU6-37P-201ENST00000362692 107 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNU5A-1-201ENST00000362698 116 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNU6-595P-201ENST00000363944 107 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNU6-11P-201ENST00000364234 107 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNU4-50P-201ENST00000364361 141 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNU6-7-201ENST00000364784 107 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNU6-8-201ENST00000365467 107 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNU6-25P-201ENST00000383873 107 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNU6-1-201ENST00000383898 107 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNU6-48P-201ENST00000384161 107 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNU6-36P-201ENST00000384172 107 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNU6-4P-201ENST00000384205 107 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNU6-5P-201ENST00000384238 107 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 Y_RNA.458-201ENST00000384240 102 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNU6-3P-201ENST00000384314 107 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNU6-16P-201ENST00000384385 107 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNU6-15P-201ENST00000384534 107 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNU6-2-201ENST00000384627 107 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNU6-29P-201ENST00000384637 107 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNU6-9-201ENST00000384776 107 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 MIR625-201ENST00000385047 85 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 SNORA57.1-201ENST00000391227 145 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RNU6-493P-201ENST00000391321 108 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 RPL21P17-201ENST00000397467 475 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
GFI1BQ5VTD9 MIR887-201ENST00000401258 79 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 HSPE1P26-201ENST00000405341 275 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.56□□□□□ -2
GFI1BQ5VTD9 AL445584.1-201ENST00000431451 330 ntBASIC2.56□□□□□ -2
GFI1BQ5VTD9 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.56□□□□□ -2
GFI1BQ5VTD9 RPL29P29-201ENST00000448725 423 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 162 ms