Protein–RNA interactions for Protein: Q15059

BRD3, Bromodomain-containing protein 3, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3Q15059 SNAP23P1-201ENST00000433229 246 ntBASIC3.12□□□□□ -1.91
BRD3Q15059 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.12□□□□□ -1.91
BRD3Q15059 USP9YP8-201ENST00000441913 500 ntBASIC3.12□□□□□ -1.91
BRD3Q15059 AL359672.1-201ENST00000442302 409 ntBASIC3.12□□□□□ -1.91
BRD3Q15059 MTCO2P3-201ENST00000442543 421 ntBASIC3.12□□□□□ -1.91
BRD3Q15059 RN7SL863P-201ENST00000462370 296 ntBASIC3.12□□□□□ -1.91
BRD3Q15059 RPS29P25-201ENST00000481709 171 ntBASIC3.12□□□□□ -1.91
BRD3Q15059 RN7SL504P-201ENST00000494496 287 ntBASIC3.12□□□□□ -1.91
BRD3Q15059 CKS1BP2-201ENST00000497342 240 ntBASIC3.12□□□□□ -1.91
BRD3Q15059 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.12□□□□□ -1.91
BRD3Q15059 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.12□□□□□ -1.91
BRD3Q15059 AC009314.1-201ENST00000603871 304 ntBASIC3.12□□□□□ -1.91
BRD3Q15059 AC007179.3-201ENST00000604976 235 ntBASIC3.12□□□□□ -1.91
BRD3Q15059 CTHRC1P1-201ENST00000605383 469 ntBASIC3.12□□□□□ -1.91
BRD3Q15059 FAM157A-202ENST00000615155 405 ntBASIC3.12□□□□□ -1.91
BRD3Q15059 MIR3662-201ENST00000637030 95 ntBASIC3.12□□□□□ -1.91
BRD3Q15059 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.12□□□□□ -1.91
BRD3Q15059 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
BRD3Q15059 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
BRD3Q15059 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
BRD3Q15059 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.11□□□□□ -1.91
BRD3Q15059 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
BRD3Q15059 U3.13-201ENST00000364804 214 ntBASIC3.11□□□□□ -1.91
BRD3Q15059 AL445529.1-201ENST00000398713 389 ntBASIC3.11□□□□□ -1.91
BRD3Q15059 Y_RNA.599-201ENST00000410489 109 ntBASIC3.11□□□□□ -1.91
BRD3Q15059 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.11□□□□□ -1.91
BRD3Q15059 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.11□□□□□ -1.91
BRD3Q15059 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.11□□□□□ -1.91
BRD3Q15059 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.11□□□□□ -1.91
BRD3Q15059 CYP2C59P-201ENST00000457790 269 ntBASIC3.11□□□□□ -1.91
BRD3Q15059 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.11□□□□□ -1.91
BRD3Q15059 AC103975.1-201ENST00000482506 483 ntBASIC3.11□□□□□ -1.91
BRD3Q15059 MTCYBP18-201ENST00000501056 747 ntBASIC3.11□□□□□ -1.91
BRD3Q15059 AC008628.2-201ENST00000502605 298 ntBASIC3.11□□□□□ -1.91
BRD3Q15059 AIG1P1-201ENST00000503376 148 ntBASIC3.11□□□□□ -1.91
BRD3Q15059 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.11□□□□□ -1.91
BRD3Q15059 AC104576.1-201ENST00000524225 88 ntBASIC3.11□□□□□ -1.91
BRD3Q15059 CBX3P7-201ENST00000532876 502 ntBASIC3.11□□□□□ -1.91
BRD3Q15059 AC004486.1-201ENST00000546846 233 ntBASIC3.11□□□□□ -1.91
BRD3Q15059 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.11□□□□□ -1.91
BRD3Q15059 MIR3670-2-201ENST00000582974 65 ntBASIC3.11□□□□□ -1.91
BRD3Q15059 MIR3670-1-201ENST00000584160 65 ntBASIC3.11□□□□□ -1.91
BRD3Q15059 MIR3670-3-201ENST00000584855 65 ntBASIC3.11□□□□□ -1.91
BRD3Q15059 ELOCP5-201ENST00000604924 333 ntBASIC3.11□□□□□ -1.91
BRD3Q15059 MIR3670-4-201ENST00000612260 65 ntBASIC3.11□□□□□ -1.91
BRD3Q15059 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
BRD3Q15059 AC007318.2-201ENST00000620999 243 ntBASIC3.11□□□□□ -1.91
BRD3Q15059 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.11□□□□□ -1.91
BRD3Q15059 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.11□□□□□ -1.91
BRD3Q15059 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
BRD3Q15059 AC073346.2-201ENST00000624724 2058 ntBASIC3.1□□□□□ -1.91
BRD3Q15059 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
BRD3Q15059 SNORA38-201ENST00000363946 132 ntBASIC3.1□□□□□ -1.91
BRD3Q15059 SNORA38.1-201ENST00000364172 131 ntBASIC3.1□□□□□ -1.91
BRD3Q15059 RNA5SP387-201ENST00000364226 106 ntBASIC3.1□□□□□ -1.91
BRD3Q15059 RNA5SP240-201ENST00000365355 128 ntBASIC3.1□□□□□ -1.91
BRD3Q15059 CBX3P9-201ENST00000402326 552 ntBASIC3.1□□□□□ -1.91
BRD3Q15059 USP9YP20-201ENST00000419224 558 ntBASIC3.1□□□□□ -1.91
BRD3Q15059 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.1□□□□□ -1.91
BRD3Q15059 NDUFA5P4-201ENST00000436704 385 ntBASIC3.1□□□□□ -1.91
BRD3Q15059 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.1□□□□□ -1.91
BRD3Q15059 RPS29P2-201ENST00000479278 136 ntBASIC3.1□□□□□ -1.91
BRD3Q15059 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.1□□□□□ -1.91
BRD3Q15059 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.1□□□□□ -1.91
BRD3Q15059 UBL5P2-201ENST00000583788 219 ntBASIC3.1□□□□□ -1.91
BRD3Q15059 AP003465.2-201ENST00000602571 373 ntBASIC3.1□□□□□ -1.91
BRD3Q15059 AC146944.4-201ENST00000602697 718 ntBASIC3.1□□□□□ -1.91
BRD3Q15059 AC064836.2-201ENST00000609491 462 ntBASIC3.1□□□□□ -1.91
BRD3Q15059 AC096577.2-201ENST00000611455 153 ntBASIC3.1□□□□□ -1.91
BRD3Q15059 AC018692.3-201ENST00000623929 123 ntBASIC3.1□□□□□ -1.91
BRD3Q15059 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.1□□□□□ -1.91
BRD3Q15059 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
BRD3Q15059 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
BRD3Q15059 RNU6-1329P-201ENST00000365664 107 ntBASIC3.09□□□□□ -1.91
BRD3Q15059 RNU6-1032P-201ENST00000384100 107 ntBASIC3.09□□□□□ -1.91
BRD3Q15059 RNU6-43P-201ENST00000384302 107 ntBASIC3.09□□□□□ -1.91
BRD3Q15059 Y_RNA.530-201ENST00000384587 101 ntBASIC3.09□□□□□ -1.91
BRD3Q15059 MIR95-201ENST00000385072 81 ntBASIC3.09□□□□□ -1.91
BRD3Q15059 SNORD67-201ENST00000390833 111 ntBASIC3.09□□□□□ -1.91
BRD3Q15059 MIR450B-201ENST00000401182 78 ntBASIC3.09□□□□□ -1.91
BRD3Q15059 RNA5SP118-201ENST00000410385 109 ntBASIC3.09□□□□□ -1.91
BRD3Q15059 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.09□□□□□ -1.91
BRD3Q15059 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.09□□□□□ -1.91
BRD3Q15059 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.09□□□□□ -1.91
BRD3Q15059 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.09□□□□□ -1.91
BRD3Q15059 AL161788.1-201ENST00000441805 169 ntBASIC3.09□□□□□ -1.91
BRD3Q15059 AP000705.1-201ENST00000454567 350 ntBASIC3.09□□□□□ -1.91
BRD3Q15059 AC098799.2-201ENST00000509466 868 ntBASIC3.09□□□□□ -1.91
BRD3Q15059 RNU6-1332P-201ENST00000516666 104 ntBASIC3.09□□□□□ -1.91
BRD3Q15059 IMMP1LP2-201ENST00000552954 492 ntBASIC3.09□□□□□ -1.91
BRD3Q15059 AC138761.3-201ENST00000579993 334 ntBASIC3.09□□□□□ -1.91
BRD3Q15059 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.09□□□□□ -1.91
BRD3Q15059 AC007014.2-201ENST00000615581 479 ntBASIC3.09□□□□□ -1.91
BRD3Q15059 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
BRD3Q15059 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
BRD3Q15059 VTRNA1-1-201ENST00000363120 99 ntBASIC3.08□□□□□ -1.92
BRD3Q15059 Y_RNA.100-201ENST00000363141 102 ntBASIC3.08□□□□□ -1.92
BRD3Q15059 RNU6-254P-201ENST00000363377 107 ntBASIC3.08□□□□□ -1.92
BRD3Q15059 RNU6-1285P-201ENST00000363480 105 ntBASIC3.08□□□□□ -1.92
BRD3Q15059 SNORD113-7-201ENST00000363762 77 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms