Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 SCN1A-220ENST00000641603 12506 ntBASIC4.19□□□□□ -1.74
SOX4Q06945 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.19□□□□□ -1.74
SOX4Q06945 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SOX4Q06945 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SOX4Q06945 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SOX4Q06945 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.19□□□□□ -1.74
SOX4Q06945 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SOX4Q06945 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.19□□□□□ -1.74
SOX4Q06945 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
SOX4Q06945 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SOX4Q06945 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX4Q06945 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX4Q06945 RNU1-108P-201ENST00000362556 161 ntBASIC4.18□□□□□ -1.74
SOX4Q06945 RNU6-961P-201ENST00000363893 105 ntBASIC4.18□□□□□ -1.74
SOX4Q06945 RNU6-335P-201ENST00000364563 113 ntBASIC4.18□□□□□ -1.74
SOX4Q06945 TOMM22P1-201ENST00000418578 312 ntBASIC4.18□□□□□ -1.74
SOX4Q06945 POLR2KP2-201ENST00000438155 177 ntBASIC4.18□□□□□ -1.74
SOX4Q06945 HMGB1P37-201ENST00000439613 609 ntBASIC4.18□□□□□ -1.74
SOX4Q06945 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.18□□□□□ -1.74
SOX4Q06945 MRPS10P1-201ENST00000448483 130 ntBASIC4.18□□□□□ -1.74
SOX4Q06945 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.18□□□□□ -1.74
SOX4Q06945 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.18□□□□□ -1.74
SOX4Q06945 AC010469.1-201ENST00000463864 576 ntBASIC4.18□□□□□ -1.74
SOX4Q06945 SNORA70.16-201ENST00000516390 95 ntBASIC4.18□□□□□ -1.74
SOX4Q06945 AP004607.1-201ENST00000524456 203 ntBASIC4.18□□□□□ -1.74
SOX4Q06945 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.18□□□□□ -1.74
SOX4Q06945 AC006001.4-201ENST00000622243 395 ntBASIC4.18□□□□□ -1.74
SOX4Q06945 CR392039.5-201ENST00000623201 510 ntBASIC4.18□□□□□ -1.74
SOX4Q06945 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.18□□□□□ -1.74
SOX4Q06945 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX4Q06945 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SOX4Q06945 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SOX4Q06945 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.18□□□□□ -1.74
SOX4Q06945 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SOX4Q06945 ZNF962P-201ENST00000443465 3140 ntBASIC4.18□□□□□ -1.74
SOX4Q06945 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SOX4Q06945 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.18□□□□□ -1.74
SOX4Q06945 AC015813.6-201ENST00000624409 5808 ntBASIC4.18□□□□□ -1.74
SOX4Q06945 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX4Q06945 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
SOX4Q06945 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SOX4Q06945 AC011266.1-201ENST00000624119 3569 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
SOX4Q06945 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.17□□□□□ -1.74
SOX4Q06945 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SOX4Q06945 Y_RNA.230-201ENST00000364348 109 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 SNORA73.2-201ENST00000364946 201 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 RNA5SP97-201ENST00000365006 84 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 Y_RNA.319-201ENST00000365138 92 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 RNU6-1027P-201ENST00000383998 107 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 Y_RNA.441-201ENST00000384123 112 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 MIR23B-201ENST00000384832 97 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 MIR124-3-201ENST00000384866 87 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 MIR329-1-201ENST00000385028 80 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 RNU6ATAC-201ENST00000408749 126 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 RNU2-51P-201ENST00000410708 197 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 RNU6-1245P-201ENST00000411130 106 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 RNU6-1001P-201ENST00000411265 100 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 BMS1P22-201ENST00000414726 313 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 AL139247.1-201ENST00000422768 325 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 GOT2P5-201ENST00000433995 546 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 SETP5-201ENST00000437270 562 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 UQCRBP2-201ENST00000447827 297 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 AL133547.1-201ENST00000448546 220 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.17□□□□□ -1.74
SOX4Q06945 AC074133.1-201ENST00000515696 183 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.17□□□□□ -1.74
SOX4Q06945 AL391261.3-201ENST00000557194 520 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 LINC00933-203ENST00000559812 219 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 UBL5P4-201ENST00000562584 236 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 MIR4444-1-201ENST00000581696 74 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 MIR4444-2-201ENST00000584390 74 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 SNRPGP15-201ENST00000600149 222 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 AC005828.6-201ENST00000606610 232 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.17□□□□□ -1.74
SOX4Q06945 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.17□□□□□ -1.74
SOX4Q06945 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.17□□□□□ -1.74
SOX4Q06945 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SOX4Q06945 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SOX4Q06945 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SOX4Q06945 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.16□□□□□ -1.74
SOX4Q06945 Y_RNA.331-201ENST00000365267 102 ntBASIC4.16□□□□□ -1.74
SOX4Q06945 Z98749.2-208ENST00000381646 500 ntBASIC4.16□□□□□ -1.74
SOX4Q06945 RNU6-142P-201ENST00000384019 107 ntBASIC4.16□□□□□ -1.74
SOX4Q06945 RNU6-1145P-201ENST00000384246 107 ntBASIC4.16□□□□□ -1.74
SOX4Q06945 U8.10-201ENST00000384260 133 ntBASIC4.16□□□□□ -1.74
SOX4Q06945 MIR199A2-201ENST00000385289 110 ntBASIC4.16□□□□□ -1.74
SOX4Q06945 HLFP1-201ENST00000402375 499 ntBASIC4.16□□□□□ -1.74
SOX4Q06945 SNORA3.3-201ENST00000408712 125 ntBASIC4.16□□□□□ -1.74
SOX4Q06945 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SOX4Q06945 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.16□□□□□ -1.74
SOX4Q06945 RPL23AP3-201ENST00000453844 468 ntBASIC4.16□□□□□ -1.74
SOX4Q06945 RNU6-703P-201ENST00000516946 107 ntBASIC4.16□□□□□ -1.74
SOX4Q06945 RNU6-1183P-201ENST00000517054 60 ntBASIC4.16□□□□□ -1.74
SOX4Q06945 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.16□□□□□ -1.74
SOX4Q06945 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.16□□□□□ -1.74
SOX4Q06945 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.16□□□□□ -1.74
SOX4Q06945 GNRHR2P1-201ENST00000555315 631 ntBASIC4.16□□□□□ -1.74
SOX4Q06945 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SOX4Q06945 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms