Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 EIF1P1-201ENST00000421436 341 ntBASIC1.09□□□□□ -2.23
TPM4P67936 TOMM20P4-201ENST00000427861 435 ntBASIC1.09□□□□□ -2.23
TPM4P67936 FTH1P12-201ENST00000432137 551 ntBASIC1.09□□□□□ -2.23
TPM4P67936 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.09□□□□□ -2.23
TPM4P67936 KATNBL1P3-201ENST00000443475 909 ntBASIC1.09□□□□□ -2.23
TPM4P67936 RPL39P29-201ENST00000447779 157 ntBASIC1.09□□□□□ -2.23
TPM4P67936 OR2AQ1P-201ENST00000451972 200 ntBASIC1.09□□□□□ -2.23
TPM4P67936 RNU7-95P-201ENST00000459222 64 ntBASIC1.09□□□□□ -2.23
TPM4P67936 snoU109.2-201ENST00000459316 135 ntBASIC1.09□□□□□ -2.23
TPM4P67936 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.09□□□□□ -2.23
TPM4P67936 SNORA3.4-201ENST00000515969 96 ntBASIC1.09□□□□□ -2.23
TPM4P67936 RNU7-40P-201ENST00000516397 64 ntBASIC1.09□□□□□ -2.23
TPM4P67936 RNA5SP404-201ENST00000517118 132 ntBASIC1.09□□□□□ -2.23
TPM4P67936 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.09□□□□□ -2.23
TPM4P67936 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.09□□□□□ -2.23
TPM4P67936 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.09□□□□□ -2.23
TPM4P67936 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.09□□□□□ -2.23
TPM4P67936 AP000654.2-201ENST00000605633 586 ntBASIC1.09□□□□□ -2.23
TPM4P67936 AC025754.2-201ENST00000606491 432 ntBASIC1.09□□□□□ -2.23
TPM4P67936 AC120349.3-201ENST00000624377 529 ntBASIC1.09□□□□□ -2.23
TPM4P67936 AC241585.2-209ENST00000638217 143 ntBASIC1.09□□□□□ -2.23
TPM4P67936 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
TPM4P67936 LINC02555-201ENST00000563933 1951 ntBASIC1.08□□□□□ -2.24
TPM4P67936 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
TPM4P67936 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TPM4P67936 RNU6-560P-201ENST00000364007 108 ntBASIC1.08□□□□□ -2.24
TPM4P67936 RNU4-38P-201ENST00000364472 129 ntBASIC1.08□□□□□ -2.24
TPM4P67936 AL357139.1-201ENST00000407792 426 ntBASIC1.08□□□□□ -2.24
TPM4P67936 RNU4-62P-201ENST00000410125 130 ntBASIC1.08□□□□□ -2.24
TPM4P67936 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.08□□□□□ -2.24
TPM4P67936 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
TPM4P67936 AC013262.1-201ENST00000426710 252 ntBASIC1.08□□□□□ -2.24
TPM4P67936 CALM1P1-201ENST00000442082 433 ntBASIC1.08□□□□□ -2.24
TPM4P67936 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.08□□□□□ -2.24
TPM4P67936 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.08□□□□□ -2.24
TPM4P67936 RPL9P9-202ENST00000466501 579 ntBASIC1.08□□□□□ -2.24
TPM4P67936 MTND3P13-201ENST00000574391 343 ntBASIC1.08□□□□□ -2.24
TPM4P67936 AC008507.2-201ENST00000588402 1176 ntBASIC1.08□□□□□ -2.24
TPM4P67936 MIR15A-201ENST00000607334 83 ntBASIC1.08□□□□□ -2.24
TPM4P67936 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.08□□□□□ -2.24
TPM4P67936 Y_RNA.255-201ENST00000364581 97 ntBASIC1.07□□□□□ -2.24
TPM4P67936 MRPL35P1-201ENST00000404272 572 ntBASIC1.07□□□□□ -2.24
TPM4P67936 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.07□□□□□ -2.24
TPM4P67936 AL627311.1-201ENST00000431514 115 ntBASIC1.07□□□□□ -2.24
TPM4P67936 HSPE1P9-201ENST00000440046 311 ntBASIC1.07□□□□□ -2.24
TPM4P67936 BTBD7P2-201ENST00000441962 620 ntBASIC1.07□□□□□ -2.24
TPM4P67936 AC093899.1-201ENST00000457984 376 ntBASIC1.07□□□□□ -2.24
TPM4P67936 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.07□□□□□ -2.24
TPM4P67936 RNA5SP216-201ENST00000516111 123 ntBASIC1.07□□□□□ -2.24
TPM4P67936 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.07□□□□□ -2.24
TPM4P67936 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.07□□□□□ -2.24
TPM4P67936 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.07□□□□□ -2.24
TPM4P67936 CYP3A52P-201ENST00000563326 91 ntBASIC1.07□□□□□ -2.24
TPM4P67936 AC024060.1-201ENST00000607052 494 ntBASIC1.07□□□□□ -2.24
TPM4P67936 AL391813.2-201ENST00000609113 322 ntBASIC1.07□□□□□ -2.24
TPM4P67936 AL355816.2-201ENST00000610049 647 ntBASIC1.07□□□□□ -2.24
TPM4P67936 AL355472.4-201ENST00000610233 626 ntBASIC1.07□□□□□ -2.24
TPM4P67936 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.07□□□□□ -2.24
TPM4P67936 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.07□□□□□ -2.24
TPM4P67936 AC095038.3-201ENST00000634439 195 ntBASIC1.07□□□□□ -2.24
TPM4P67936 MIR412-201ENST00000362142 91 ntBASIC1.06□□□□□ -2.24
TPM4P67936 Y_RNA.332-201ENST00000365271 113 ntBASIC1.06□□□□□ -2.24
TPM4P67936 RNU6-26P-201ENST00000383985 107 ntBASIC1.06□□□□□ -2.24
TPM4P67936 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.06□□□□□ -2.24
TPM4P67936 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.06□□□□□ -2.24
TPM4P67936 VPS26BP1-201ENST00000417155 755 ntBASIC1.06□□□□□ -2.24
TPM4P67936 MTCYBP5-201ENST00000423752 1135 ntBASIC1.06□□□□□ -2.24
TPM4P67936 TIMM9P1-201ENST00000436122 256 ntBASIC1.06□□□□□ -2.24
TPM4P67936 RPS23P4-201ENST00000487908 423 ntBASIC1.06□□□□□ -2.24
TPM4P67936 CENPUP1-201ENST00000526649 1202 ntBASIC1.06□□□□□ -2.24
TPM4P67936 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.06□□□□□ -2.24
TPM4P67936 AC015688.6-201ENST00000577737 104 ntBASIC1.06□□□□□ -2.24
TPM4P67936 AP003465.2-201ENST00000602571 373 ntBASIC1.06□□□□□ -2.24
TPM4P67936 AC174048.1-201ENST00000603389 144 ntBASIC1.06□□□□□ -2.24
TPM4P67936 AL596327.1-201ENST00000603629 213 ntBASIC1.06□□□□□ -2.24
TPM4P67936 AC124016.2-201ENST00000610058 665 ntBASIC1.06□□□□□ -2.24
TPM4P67936 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
TPM4P67936 AC091948.2-201ENST00000636510 279 ntBASIC1.06□□□□□ -2.24
TPM4P67936 RNU6-462P-201ENST00000362659 105 ntBASIC1.05□□□□□ -2.24
TPM4P67936 SNORD3E-201ENST00000362899 217 ntBASIC1.05□□□□□ -2.24
TPM4P67936 RNU1-22P-201ENST00000363334 158 ntBASIC1.05□□□□□ -2.24
TPM4P67936 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.05□□□□□ -2.24
TPM4P67936 RPL23AP32-201ENST00000395315 459 ntBASIC1.05□□□□□ -2.24
TPM4P67936 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.05□□□□□ -2.24
TPM4P67936 AL161935.2-201ENST00000414627 60 ntBASIC1.05□□□□□ -2.24
TPM4P67936 NDUFB1P2-201ENST00000449477 176 ntBASIC1.05□□□□□ -2.24
TPM4P67936 RPS27AP8-201ENST00000452665 445 ntBASIC1.05□□□□□ -2.24
TPM4P67936 RPL39P28-201ENST00000465655 155 ntBASIC1.05□□□□□ -2.24
TPM4P67936 AC097473.1-201ENST00000508142 408 ntBASIC1.05□□□□□ -2.24
TPM4P67936 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.05□□□□□ -2.24
TPM4P67936 MIR3945-201ENST00000581853 98 ntBASIC1.05□□□□□ -2.24
TPM4P67936 VN1R82P-201ENST00000601481 356 ntBASIC1.05□□□□□ -2.24
TPM4P67936 AL022154.1-201ENST00000604698 785 ntBASIC1.05□□□□□ -2.24
TPM4P67936 AC112220.3-201ENST00000605502 502 ntBASIC1.05□□□□□ -2.24
TPM4P67936 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.05□□□□□ -2.24
TPM4P67936 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.04□□□□□ -2.24
TPM4P67936 AC092809.3-201ENST00000415453 231 ntBASIC1.04□□□□□ -2.24
TPM4P67936 AL590556.1-201ENST00000423231 483 ntBASIC1.04□□□□□ -2.24
TPM4P67936 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.04□□□□□ -2.24
TPM4P67936 AL365400.1-201ENST00000431854 640 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms