Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
YBX1P67809 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
YBX1P67809 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
YBX1P67809 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
YBX1P67809 SNORA71.3-201ENST00000362582 128 ntBASIC3.79□□□□□ -1.8
YBX1P67809 RNU6-527P-201ENST00000363425 104 ntBASIC3.79□□□□□ -1.8
YBX1P67809 RNU6-17P-201ENST00000384245 107 ntBASIC3.79□□□□□ -1.8
YBX1P67809 RNU6-18P-201ENST00000384527 107 ntBASIC3.79□□□□□ -1.8
YBX1P67809 Y_RNA.569-201ENST00000384749 103 ntBASIC3.79□□□□□ -1.8
YBX1P67809 MIR32-201ENST00000384965 70 ntBASIC3.79□□□□□ -1.8
YBX1P67809 MIR449B-201ENST00000384995 97 ntBASIC3.79□□□□□ -1.8
YBX1P67809 MIR613-201ENST00000385248 95 ntBASIC3.79□□□□□ -1.8
YBX1P67809 Y_RNA.590-201ENST00000410140 107 ntBASIC3.79□□□□□ -1.8
YBX1P67809 RN7SKP51-201ENST00000410781 304 ntBASIC3.79□□□□□ -1.8
YBX1P67809 NDUFB4P7-201ENST00000423198 363 ntBASIC3.79□□□□□ -1.8
YBX1P67809 RPL27AP8-201ENST00000424277 446 ntBASIC3.79□□□□□ -1.8
YBX1P67809 RPL21P66-201ENST00000426566 466 ntBASIC3.79□□□□□ -1.8
YBX1P67809 AC083863.1-201ENST00000438811 231 ntBASIC3.79□□□□□ -1.8
YBX1P67809 RPS15AP7-201ENST00000439294 405 ntBASIC3.79□□□□□ -1.8
YBX1P67809 AC010285.1-201ENST00000470580 392 ntBASIC3.79□□□□□ -1.8
YBX1P67809 PPIAP15-201ENST00000479662 484 ntBASIC3.79□□□□□ -1.8
YBX1P67809 RNU6-346P-201ENST00000516288 111 ntBASIC3.79□□□□□ -1.8
YBX1P67809 RNU2-58P-201ENST00000516403 183 ntBASIC3.79□□□□□ -1.8
YBX1P67809 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.79□□□□□ -1.8
YBX1P67809 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.79□□□□□ -1.8
YBX1P67809 MIR4298-201ENST00000584380 73 ntBASIC3.79□□□□□ -1.8
YBX1P67809 AL606490.9-201ENST00000603331 271 ntBASIC3.79□□□□□ -1.8
YBX1P67809 AP002826.1-201ENST00000608835 315 ntBASIC3.79□□□□□ -1.8
YBX1P67809 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.79□□□□□ -1.8
YBX1P67809 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.79□□□□□ -1.8
YBX1P67809 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
YBX1P67809 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
YBX1P67809 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
YBX1P67809 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
YBX1P67809 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
YBX1P67809 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
YBX1P67809 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.78□□□□□ -1.8
YBX1P67809 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
YBX1P67809 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
YBX1P67809 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
YBX1P67809 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
YBX1P67809 RNU6-213P-201ENST00000384051 104 ntBASIC3.78□□□□□ -1.8
YBX1P67809 RNU6-318P-201ENST00000384283 103 ntBASIC3.78□□□□□ -1.8
YBX1P67809 RNU6-72P-201ENST00000384285 79 ntBASIC3.78□□□□□ -1.8
YBX1P67809 RNU6-21P-201ENST00000384710 107 ntBASIC3.78□□□□□ -1.8
YBX1P67809 HMGN2P8-201ENST00000391458 268 ntBASIC3.78□□□□□ -1.8
YBX1P67809 RPS4XP3-201ENST00000398541 413 ntBASIC3.78□□□□□ -1.8
YBX1P67809 RNU6ATAC-201ENST00000408749 126 ntBASIC3.78□□□□□ -1.8
YBX1P67809 RNU6-651P-201ENST00000411040 105 ntBASIC3.78□□□□□ -1.8
YBX1P67809 RNU5A-5P-201ENST00000411054 116 ntBASIC3.78□□□□□ -1.8
YBX1P67809 RNU2-61P-201ENST00000411069 191 ntBASIC3.78□□□□□ -1.8
YBX1P67809 CYCSP19-201ENST00000411715 316 ntBASIC3.78□□□□□ -1.8
YBX1P67809 AP000907.1-201ENST00000428428 510 ntBASIC3.78□□□□□ -1.8
YBX1P67809 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.78□□□□□ -1.8
YBX1P67809 snoU13.4-201ENST00000458916 104 ntBASIC3.78□□□□□ -1.8
YBX1P67809 RN7SL93P-201ENST00000463035 293 ntBASIC3.78□□□□□ -1.8
YBX1P67809 AC091021.1-201ENST00000468051 388 ntBASIC3.78□□□□□ -1.8
YBX1P67809 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.78□□□□□ -1.8
YBX1P67809 RPL23AP49-201ENST00000492925 468 ntBASIC3.78□□□□□ -1.8
YBX1P67809 RNU7-110P-201ENST00000516891 62 ntBASIC3.78□□□□□ -1.8
YBX1P67809 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.78□□□□□ -1.8
YBX1P67809 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.78□□□□□ -1.8
YBX1P67809 AL078605.1-201ENST00000603529 500 ntBASIC3.78□□□□□ -1.8
YBX1P67809 RPL23AP88-201ENST00000605759 454 ntBASIC3.78□□□□□ -1.8
YBX1P67809 AC027309.3-201ENST00000623419 351 ntBASIC3.78□□□□□ -1.8
YBX1P67809 SCARNA4-202ENST00000625402 129 ntBASIC3.78□□□□□ -1.8
YBX1P67809 U6.99-201ENST00000637524 83 ntBASIC3.78□□□□□ -1.8
YBX1P67809 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.78□□□□□ -1.8
YBX1P67809 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
YBX1P67809 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.78□□□□□ -1.8
YBX1P67809 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
YBX1P67809 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.78□□□□□ -1.8
YBX1P67809 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
YBX1P67809 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.78□□□□□ -1.8
YBX1P67809 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
YBX1P67809 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
YBX1P67809 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
YBX1P67809 USP8P1-201ENST00000494673 3183 ntBASIC3.77□□□□□ -1.81
YBX1P67809 SNORA25.1-201ENST00000362326 128 ntBASIC3.77□□□□□ -1.81
YBX1P67809 RNU1-18P-201ENST00000363062 164 ntBASIC3.77□□□□□ -1.81
YBX1P67809 RNU6-105P-201ENST00000363909 104 ntBASIC3.77□□□□□ -1.81
YBX1P67809 RNU6-514P-201ENST00000384208 107 ntBASIC3.77□□□□□ -1.81
YBX1P67809 MIR1290-201ENST00000408735 78 ntBASIC3.77□□□□□ -1.81
YBX1P67809 SNORD12B-201ENST00000410433 91 ntBASIC3.77□□□□□ -1.81
YBX1P67809 RAB9AP3-201ENST00000412737 573 ntBASIC3.77□□□□□ -1.81
YBX1P67809 AC098614.2-201ENST00000426040 255 ntBASIC3.77□□□□□ -1.81
YBX1P67809 EIF1P2-201ENST00000428233 350 ntBASIC3.77□□□□□ -1.81
YBX1P67809 FTH1P6-201ENST00000430768 320 ntBASIC3.77□□□□□ -1.81
YBX1P67809 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.77□□□□□ -1.81
YBX1P67809 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.77□□□□□ -1.81
YBX1P67809 CYCSP32-201ENST00000440548 321 ntBASIC3.77□□□□□ -1.81
YBX1P67809 RAB9AP1-201ENST00000449393 573 ntBASIC3.77□□□□□ -1.81
YBX1P67809 MIR2114-201ENST00000516645 80 ntBASIC3.77□□□□□ -1.81
YBX1P67809 RNU6-1073P-201ENST00000517182 106 ntBASIC3.77□□□□□ -1.81
YBX1P67809 AC053481.4-201ENST00000583164 216 ntBASIC3.77□□□□□ -1.81
YBX1P67809 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.77□□□□□ -1.81
YBX1P67809 AL161756.2-201ENST00000604597 246 ntBASIC3.77□□□□□ -1.81
YBX1P67809 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.77□□□□□ -1.81
YBX1P67809 RMST_6.1-201ENST00000611980 203 ntBASIC3.77□□□□□ -1.81
YBX1P67809 AC090132.2-201ENST00000615881 347 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms