Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 U2.19-201ENST00000618602 191 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 RNU2-1-201ENST00000618664 191 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 AL590808.1-201ENST00000618696 141 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 U2.6-201ENST00000619225 191 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 U2.5-201ENST00000619465 191 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 AC026585.1-201ENST00000619582 524 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 U2.10-201ENST00000620268 191 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.85□□□□□ -2.11
PKNOX1P55347 SCARNA15.3-201ENST00000626315 122 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 SCARNA4.1-201ENST00000628597 123 ntBASIC1.85□□□□□ -2.11
PKNOX1P55347 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
PKNOX1P55347 AL354685.2-201ENST00000448218 1447 ntBASIC1.84□□□□□ -2.11
PKNOX1P55347 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.84□□□□□ -2.11
PKNOX1P55347 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
PKNOX1P55347 RNU6-78P-201ENST00000362897 107 ntBASIC1.84□□□□□ -2.11
PKNOX1P55347 RNU6-1097P-201ENST00000363586 107 ntBASIC1.84□□□□□ -2.11
PKNOX1P55347 Y_RNA.201-201ENST00000364052 96 ntBASIC1.84□□□□□ -2.11
PKNOX1P55347 RNU2-23P-201ENST00000410545 195 ntBASIC1.84□□□□□ -2.11
PKNOX1P55347 AL669831.1-202ENST00000428504 417 ntBASIC1.84□□□□□ -2.11
PKNOX1P55347 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.84□□□□□ -2.11
PKNOX1P55347 GTF2IP13-201ENST00000438487 386 ntBASIC1.84□□□□□ -2.11
PKNOX1P55347 AC244505.5-201ENST00000443639 207 ntBASIC1.84□□□□□ -2.11
PKNOX1P55347 AC012308.1-201ENST00000451232 178 ntBASIC1.84□□□□□ -2.11
PKNOX1P55347 AL121594.1-201ENST00000475906 575 ntBASIC1.84□□□□□ -2.11
PKNOX1P55347 AC107032.1-201ENST00000485945 480 ntBASIC1.84□□□□□ -2.11
PKNOX1P55347 MTCYBP40-201ENST00000509390 1135 ntBASIC1.84□□□□□ -2.11
PKNOX1P55347 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.84□□□□□ -2.11
PKNOX1P55347 HSPE1P18-201ENST00000517602 280 ntBASIC1.84□□□□□ -2.11
PKNOX1P55347 AL158211.1-201ENST00000566763 763 ntBASIC1.84□□□□□ -2.11
PKNOX1P55347 Z84480.1-201ENST00000605131 311 ntBASIC1.84□□□□□ -2.11
PKNOX1P55347 AL627230.6-201ENST00000611129 280 ntBASIC1.84□□□□□ -2.11
PKNOX1P55347 AC008121.3-201ENST00000618726 433 ntBASIC1.84□□□□□ -2.11
PKNOX1P55347 U6.114-201ENST00000636407 96 ntBASIC1.84□□□□□ -2.11
PKNOX1P55347 AC008555.8-201ENST00000623602 2168 ntBASIC1.83□□□□□ -2.12
PKNOX1P55347 RNU6-715P-201ENST00000365204 103 ntBASIC1.83□□□□□ -2.12
PKNOX1P55347 RNU6-45P-201ENST00000384471 107 ntBASIC1.83□□□□□ -2.12
PKNOX1P55347 RAP1BP3-201ENST00000407180 549 ntBASIC1.83□□□□□ -2.12
PKNOX1P55347 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.83□□□□□ -2.12
PKNOX1P55347 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.83□□□□□ -2.12
PKNOX1P55347 AC133104.1-201ENST00000429100 218 ntBASIC1.83□□□□□ -2.12
PKNOX1P55347 AL365400.1-201ENST00000431854 640 ntBASIC1.83□□□□□ -2.12
PKNOX1P55347 AL139415.2-201ENST00000431968 163 ntBASIC1.83□□□□□ -2.12
PKNOX1P55347 AL451074.3-201ENST00000437709 472 ntBASIC1.83□□□□□ -2.12
PKNOX1P55347 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.83□□□□□ -2.12
PKNOX1P55347 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.83□□□□□ -2.12
PKNOX1P55347 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.83□□□□□ -2.12
PKNOX1P55347 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.83□□□□□ -2.12
PKNOX1P55347 RPS29P15-201ENST00000458329 171 ntBASIC1.83□□□□□ -2.12
PKNOX1P55347 snoU13.14-201ENST00000459372 104 ntBASIC1.83□□□□□ -2.12
PKNOX1P55347 MTCO2P6-201ENST00000463134 685 ntBASIC1.83□□□□□ -2.12
PKNOX1P55347 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.83□□□□□ -2.12
PKNOX1P55347 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.83□□□□□ -2.12
PKNOX1P55347 AC034114.1-201ENST00000520293 285 ntBASIC1.83□□□□□ -2.12
PKNOX1P55347 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.83□□□□□ -2.12
PKNOX1P55347 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.83□□□□□ -2.12
PKNOX1P55347 AC012493.3-201ENST00000604494 112 ntBASIC1.83□□□□□ -2.12
PKNOX1P55347 AC006566.1-201ENST00000608943 513 ntBASIC1.83□□□□□ -2.12
PKNOX1P55347 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.83□□□□□ -2.12
PKNOX1P55347 AC064859.1-201ENST00000624741 174 ntBASIC1.83□□□□□ -2.12
PKNOX1P55347 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
PKNOX1P55347 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PKNOX1P55347 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
PKNOX1P55347 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.82□□□□□ -2.12
PKNOX1P55347 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
PKNOX1P55347 SNORD56.1-201ENST00000362913 68 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 RNU6-1287P-201ENST00000362914 107 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 RNU6-181P-201ENST00000363225 107 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 SNORA16.1-201ENST00000364597 132 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 RNU6-1303P-201ENST00000364841 107 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PKNOX1P55347 RNU6-1029P-201ENST00000384109 107 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 RNU6-1274P-201ENST00000384557 107 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 RNU6-1060P-201ENST00000384664 107 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 MIR561-201ENST00000385216 97 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 SNORA3.2-201ENST00000408221 125 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 RNA5SP390-201ENST00000410191 113 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 RNU2-48P-201ENST00000410694 191 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 RN7SKP142-201ENST00000411236 328 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 OR9R1P-201ENST00000412200 877 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.82□□□□□ -2.12
PKNOX1P55347 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.82□□□□□ -2.12
PKNOX1P55347 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.82□□□□□ -2.12
PKNOX1P55347 AL596276.1-201ENST00000434465 418 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PKNOX1P55347 PPP1R2P5-201ENST00000457256 603 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 RNU7-182P-201ENST00000459009 62 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 BET1P1-201ENST00000482276 359 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 HMGB3P17-201ENST00000504195 649 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 MRPS17P9-201ENST00000511924 393 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 AC008549.1-201ENST00000512900 643 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.82□□□□□ -2.12
PKNOX1P55347 RNU6-445P-201ENST00000516949 107 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 RNU6-586P-201ENST00000517265 104 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.82□□□□□ -2.12
PKNOX1P55347 AC107953.1-201ENST00000522216 297 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.82□□□□□ -2.12
PKNOX1P55347 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.82□□□□□ -2.12
PKNOX1P55347 MIR4287-201ENST00000579398 78 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 AL109918.3-201ENST00000603072 338 ntBASIC1.82□□□□□ -2.12
PKNOX1P55347 AC099842.1-201ENST00000619919 596 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms