Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH13P55290 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.52□□□□□ -2.01
CDH13P55290 RNA5SP282-201ENST00000516355 108 ntBASIC2.52□□□□□ -2.01
CDH13P55290 RNA5SP367-201ENST00000516557 118 ntBASIC2.52□□□□□ -2.01
CDH13P55290 RPPH1-2P-201ENST00000516688 293 ntBASIC2.52□□□□□ -2.01
CDH13P55290 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH13P55290 AL118558.2-201ENST00000556294 238 ntBASIC2.52□□□□□ -2.01
CDH13P55290 VN1R107P-201ENST00000601784 209 ntBASIC2.52□□□□□ -2.01
CDH13P55290 AC123912.5-201ENST00000605470 343 ntBASIC2.52□□□□□ -2.01
CDH13P55290 RNU6-89P-201ENST00000606519 100 ntBASIC2.52□□□□□ -2.01
CDH13P55290 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.52□□□□□ -2.01
CDH13P55290 Y_RNA.38-201ENST00000362617 102 ntBASIC2.51□□□□□ -2.01
CDH13P55290 RNU6-451P-201ENST00000362921 107 ntBASIC2.51□□□□□ -2.01
CDH13P55290 RNU6-105P-201ENST00000363909 104 ntBASIC2.51□□□□□ -2.01
CDH13P55290 Y_RNA.378-201ENST00000365652 113 ntBASIC2.51□□□□□ -2.01
CDH13P55290 MIR218-1-201ENST00000384999 110 ntBASIC2.51□□□□□ -2.01
CDH13P55290 AC096664.2-201ENST00000411843 406 ntBASIC2.51□□□□□ -2.01
CDH13P55290 AC138623.1-201ENST00000418060 216 ntBASIC2.51□□□□□ -2.01
CDH13P55290 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.51□□□□□ -2.01
CDH13P55290 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.51□□□□□ -2.01
CDH13P55290 ERLEC1P1-201ENST00000433806 578 ntBASIC2.51□□□□□ -2.01
CDH13P55290 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.51□□□□□ -2.01
CDH13P55290 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.51□□□□□ -2.01
CDH13P55290 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.51□□□□□ -2.01
CDH13P55290 AC104389.3-201ENST00000445629 235 ntBASIC2.51□□□□□ -2.01
CDH13P55290 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.51□□□□□ -2.01
CDH13P55290 RNU7-138P-201ENST00000459479 64 ntBASIC2.51□□□□□ -2.01
CDH13P55290 RPL23AP49-201ENST00000492925 468 ntBASIC2.51□□□□□ -2.01
CDH13P55290 AC097462.2-201ENST00000504623 481 ntBASIC2.51□□□□□ -2.01
CDH13P55290 RN7SKP132-201ENST00000516001 208 ntBASIC2.51□□□□□ -2.01
CDH13P55290 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.51□□□□□ -2.01
CDH13P55290 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.51□□□□□ -2.01
CDH13P55290 AC078814.3-201ENST00000553036 491 ntBASIC2.51□□□□□ -2.01
CDH13P55290 AC027176.1-201ENST00000560204 514 ntBASIC2.51□□□□□ -2.01
CDH13P55290 AC105137.2-201ENST00000569073 466 ntBASIC2.51□□□□□ -2.01
CDH13P55290 AC092747.3-201ENST00000603769 301 ntBASIC2.51□□□□□ -2.01
CDH13P55290 AC092807.2-201ENST00000609367 243 ntBASIC2.51□□□□□ -2.01
CDH13P55290 AC090517.2-201ENST00000614966 680 ntBASIC2.51□□□□□ -2.01
CDH13P55290 AC073869.6-201ENST00000640656 341 ntBASIC2.51□□□□□ -2.01
CDH13P55290 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CDH13P55290 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.51□□□□□ -2.01
CDH13P55290 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CDH13P55290 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.5□□□□□ -2.01
CDH13P55290 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CDH13P55290 SNORD56.1-201ENST00000362913 68 ntBASIC2.5□□□□□ -2.01
CDH13P55290 RNU6-527P-201ENST00000363425 104 ntBASIC2.5□□□□□ -2.01
CDH13P55290 RNU6-1090P-201ENST00000364065 94 ntBASIC2.5□□□□□ -2.01
CDH13P55290 Y_RNA.505-201ENST00000384489 102 ntBASIC2.5□□□□□ -2.01
CDH13P55290 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CDH13P55290 EIF4E2P1-201ENST00000393781 255 ntBASIC2.5□□□□□ -2.01
CDH13P55290 RNU2-23P-201ENST00000410545 195 ntBASIC2.5□□□□□ -2.01
CDH13P55290 Z92545.1-201ENST00000411782 234 ntBASIC2.5□□□□□ -2.01
CDH13P55290 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.5□□□□□ -2.01
CDH13P55290 AL117339.3-201ENST00000418733 162 ntBASIC2.5□□□□□ -2.01
CDH13P55290 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.5□□□□□ -2.01
CDH13P55290 SRIP2-201ENST00000428470 166 ntBASIC2.5□□□□□ -2.01
CDH13P55290 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH13P55290 AC007969.2-201ENST00000441891 191 ntBASIC2.5□□□□□ -2.01
CDH13P55290 RPL7P12-201ENST00000446719 750 ntBASIC2.5□□□□□ -2.01
CDH13P55290 AC087884.1-201ENST00000469738 328 ntBASIC2.5□□□□□ -2.01
CDH13P55290 RNU6-1069P-201ENST00000516612 133 ntBASIC2.5□□□□□ -2.01
CDH13P55290 MTND1P35-201ENST00000526739 508 ntBASIC2.5□□□□□ -2.01
CDH13P55290 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.5□□□□□ -2.01
CDH13P55290 AC023824.2-201ENST00000566185 400 ntBASIC2.5□□□□□ -2.01
CDH13P55290 AC135507.2-201ENST00000612443 309 ntBASIC2.5□□□□□ -2.01
CDH13P55290 AC002543.1-201ENST00000299783 1954 ntBASIC2.5□□□□□ -2.01
CDH13P55290 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.5□□□□□ -2.01
CDH13P55290 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CDH13P55290 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CDH13P55290 Y_RNA.167-201ENST00000363735 109 ntBASIC2.49□□□□□ -2.01
CDH13P55290 RNU6-522P-201ENST00000364497 107 ntBASIC2.49□□□□□ -2.01
CDH13P55290 U3.12-201ENST00000364498 214 ntBASIC2.49□□□□□ -2.01
CDH13P55290 RNU4-12P-201ENST00000365233 139 ntBASIC2.49□□□□□ -2.01
CDH13P55290 RNU1-57P-201ENST00000384491 166 ntBASIC2.49□□□□□ -2.01
CDH13P55290 MIR9-1-201ENST00000385198 89 ntBASIC2.49□□□□□ -2.01
CDH13P55290 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CDH13P55290 AL360182.1-201ENST00000397433 468 ntBASIC2.49□□□□□ -2.01
CDH13P55290 RPS29P13-201ENST00000402041 169 ntBASIC2.49□□□□□ -2.01
CDH13P55290 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.49□□□□□ -2.01
CDH13P55290 FCF1P9-201ENST00000412546 282 ntBASIC2.49□□□□□ -2.01
CDH13P55290 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH13P55290 EIF4EP4-201ENST00000424916 578 ntBASIC2.49□□□□□ -2.01
CDH13P55290 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH13P55290 UBE2V1P8-201ENST00000437166 265 ntBASIC2.49□□□□□ -2.01
CDH13P55290 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.49□□□□□ -2.01
CDH13P55290 AC124916.1-201ENST00000444020 547 ntBASIC2.49□□□□□ -2.01
CDH13P55290 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH13P55290 snoU13.14-201ENST00000459372 104 ntBASIC2.49□□□□□ -2.01
CDH13P55290 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.49□□□□□ -2.01
CDH13P55290 RPS27P27-201ENST00000498779 255 ntBASIC2.49□□□□□ -2.01
CDH13P55290 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH13P55290 AC008526.1-201ENST00000509149 338 ntBASIC2.49□□□□□ -2.01
CDH13P55290 SMURF2P1-201ENST00000514992 481 ntBASIC2.49□□□□□ -2.01
CDH13P55290 RNU6-1038P-201ENST00000516516 104 ntBASIC2.49□□□□□ -2.01
CDH13P55290 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH13P55290 AC087854.1-201ENST00000519706 414 ntBASIC2.49□□□□□ -2.01
CDH13P55290 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH13P55290 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH13P55290 PSMA3P-201ENST00000555485 635 ntBASIC2.49□□□□□ -2.01
CDH13P55290 MIR5571-201ENST00000577998 113 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms