Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 U3.40-201ENST00000408706 208 ntBASIC2.29□□□□□ -2.04
VCPP55072 SNORA11.4-201ENST00000408823 129 ntBASIC2.29□□□□□ -2.04
VCPP55072 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.29□□□□□ -2.04
VCPP55072 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.29□□□□□ -2.04
VCPP55072 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.29□□□□□ -2.04
VCPP55072 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.29□□□□□ -2.04
VCPP55072 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.29□□□□□ -2.04
VCPP55072 CALM2P2-201ENST00000428512 440 ntBASIC2.29□□□□□ -2.04
VCPP55072 MTCO2P11-201ENST00000431069 680 ntBASIC2.29□□□□□ -2.04
VCPP55072 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.29□□□□□ -2.04
VCPP55072 MTND1P29-201ENST00000448112 647 ntBASIC2.29□□□□□ -2.04
VCPP55072 AC092001.1-201ENST00000453012 261 ntBASIC2.29□□□□□ -2.04
VCPP55072 AL583843.1-201ENST00000456070 346 ntBASIC2.29□□□□□ -2.04
VCPP55072 AC022364.2-201ENST00000457963 554 ntBASIC2.29□□□□□ -2.04
VCPP55072 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.29□□□□□ -2.04
VCPP55072 RPS27P21-201ENST00000486977 252 ntBASIC2.29□□□□□ -2.04
VCPP55072 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VCPP55072 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.29□□□□□ -2.04
VCPP55072 MIR4775-201ENST00000581168 75 ntBASIC2.29□□□□□ -2.04
VCPP55072 AC073648.5-201ENST00000603502 305 ntBASIC2.29□□□□□ -2.04
VCPP55072 AC245008.1-201ENST00000608123 476 ntBASIC2.29□□□□□ -2.04
VCPP55072 AP001486.3-201ENST00000615334 372 ntBASIC2.29□□□□□ -2.04
VCPP55072 AL031601.2-202ENST00000622650 282 ntBASIC2.29□□□□□ -2.04
VCPP55072 AC011155.2-201ENST00000623202 216 ntBASIC2.29□□□□□ -2.04
VCPP55072 AL359740.1-201ENST00000624340 592 ntBASIC2.29□□□□□ -2.04
VCPP55072 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
VCPP55072 AL359854.1-201ENST00000614203 1594 ntBASIC2.28□□□□□ -2.04
VCPP55072 MIR412-201ENST00000362142 91 ntBASIC2.28□□□□□ -2.04
VCPP55072 MIR378A-201ENST00000362177 66 ntBASIC2.28□□□□□ -2.04
VCPP55072 SNORA25.9-201ENST00000365087 128 ntBASIC2.28□□□□□ -2.04
VCPP55072 RNU6-1280P-201ENST00000365211 107 ntBASIC2.28□□□□□ -2.04
VCPP55072 RNU6-19P-201ENST00000384718 107 ntBASIC2.28□□□□□ -2.04
VCPP55072 MIR578-201ENST00000384828 96 ntBASIC2.28□□□□□ -2.04
VCPP55072 MIR518D-201ENST00000385014 87 ntBASIC2.28□□□□□ -2.04
VCPP55072 U6atac.2-201ENST00000408644 118 ntBASIC2.28□□□□□ -2.04
VCPP55072 EEF1A1P40-201ENST00000412883 573 ntBASIC2.28□□□□□ -2.04
VCPP55072 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.28□□□□□ -2.04
VCPP55072 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.28□□□□□ -2.04
VCPP55072 RPS3AP44-201ENST00000425466 790 ntBASIC2.28□□□□□ -2.04
VCPP55072 RPS15AP9-201ENST00000439856 381 ntBASIC2.28□□□□□ -2.04
VCPP55072 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.28□□□□□ -2.04
VCPP55072 BTF3P15-201ENST00000455606 336 ntBASIC2.28□□□□□ -2.04
VCPP55072 MTCO2P18-201ENST00000457151 658 ntBASIC2.28□□□□□ -2.04
VCPP55072 RNU7-182P-201ENST00000459009 62 ntBASIC2.28□□□□□ -2.04
VCPP55072 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.28□□□□□ -2.04
VCPP55072 AC116655.1-201ENST00000508324 901 ntBASIC2.28□□□□□ -2.04
VCPP55072 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.28□□□□□ -2.04
VCPP55072 AC112206.3-201ENST00000514578 389 ntBASIC2.28□□□□□ -2.04
VCPP55072 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.28□□□□□ -2.04
VCPP55072 CBX3P7-201ENST00000532876 502 ntBASIC2.28□□□□□ -2.04
VCPP55072 AK6P1-201ENST00000540219 478 ntBASIC2.28□□□□□ -2.04
VCPP55072 SUB1P2-201ENST00000556401 297 ntBASIC2.28□□□□□ -2.04
VCPP55072 uc_338.14-201ENST00000613162 166 ntBASIC2.28□□□□□ -2.04
VCPP55072 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.28□□□□□ -2.04
VCPP55072 U6.42-201ENST00000618440 107 ntBASIC2.28□□□□□ -2.04
VCPP55072 SEPT14P19-203ENST00000633205 211 ntBASIC2.28□□□□□ -2.04
VCPP55072 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.28□□□□□ -2.05
VCPP55072 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.27□□□□□ -2.05
VCPP55072 SNORD3E-201ENST00000362899 217 ntBASIC2.27□□□□□ -2.05
VCPP55072 RNU6-371P-201ENST00000364283 108 ntBASIC2.27□□□□□ -2.05
VCPP55072 RNU4-48P-201ENST00000365559 182 ntBASIC2.27□□□□□ -2.05
VCPP55072 RNU6-116P-201ENST00000384042 109 ntBASIC2.27□□□□□ -2.05
VCPP55072 RNU6-1119P-201ENST00000384349 108 ntBASIC2.27□□□□□ -2.05
VCPP55072 MIR147B-201ENST00000390185 80 ntBASIC2.27□□□□□ -2.05
VCPP55072 Y_RNA.623-201ENST00000411128 95 ntBASIC2.27□□□□□ -2.05
VCPP55072 HMGB3P2-201ENST00000411913 584 ntBASIC2.27□□□□□ -2.05
VCPP55072 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.27□□□□□ -2.05
VCPP55072 OR6C66P-201ENST00000414917 930 ntBASIC2.27□□□□□ -2.05
VCPP55072 PTGES3P4-201ENST00000426243 356 ntBASIC2.27□□□□□ -2.05
VCPP55072 Z82205.1-201ENST00000428456 297 ntBASIC2.27□□□□□ -2.05
VCPP55072 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.27□□□□□ -2.05
VCPP55072 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.27□□□□□ -2.05
VCPP55072 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.27□□□□□ -2.05
VCPP55072 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VCPP55072 TPT1P7-201ENST00000458300 517 ntBASIC2.27□□□□□ -2.05
VCPP55072 CYCSP26-201ENST00000534107 320 ntBASIC2.27□□□□□ -2.05
VCPP55072 AL138976.2-201ENST00000563989 694 ntBASIC2.27□□□□□ -2.05
VCPP55072 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.27□□□□□ -2.05
VCPP55072 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.27□□□□□ -2.05
VCPP55072 AL138889.2-201ENST00000603883 242 ntBASIC2.27□□□□□ -2.05
VCPP55072 AC097065.2-201ENST00000608159 533 ntBASIC2.27□□□□□ -2.05
VCPP55072 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.27□□□□□ -2.05
VCPP55072 AC010378.1-201ENST00000619270 362 ntBASIC2.27□□□□□ -2.05
VCPP55072 AC048344.4-201ENST00000619744 527 ntBASIC2.27□□□□□ -2.05
VCPP55072 AC136475.10-201ENST00000620253 385 ntBASIC2.27□□□□□ -2.05
VCPP55072 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VCPP55072 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.27□□□□□ -2.05
VCPP55072 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.27□□□□□ -2.05
VCPP55072 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
VCPP55072 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VCPP55072 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.26□□□□□ -2.05
VCPP55072 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
VCPP55072 RNU6-1287P-201ENST00000362914 107 ntBASIC2.26□□□□□ -2.05
VCPP55072 RNU6-486P-201ENST00000363116 107 ntBASIC2.26□□□□□ -2.05
VCPP55072 SNORA16B-201ENST00000364674 135 ntBASIC2.26□□□□□ -2.05
VCPP55072 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
VCPP55072 RNU6-1060P-201ENST00000384664 107 ntBASIC2.26□□□□□ -2.05
VCPP55072 RNU6-1179P-201ENST00000384667 107 ntBASIC2.26□□□□□ -2.05
VCPP55072 RN7SKP158-201ENST00000410453 326 ntBASIC2.26□□□□□ -2.05
VCPP55072 RNU6-1140P-201ENST00000410517 106 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms