Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 EIF4EP4-201ENST00000424916 578 ntBASIC2.57□□□□□ -2
LIMK1P53667 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.57□□□□□ -2
LIMK1P53667 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.57□□□□□ -2
LIMK1P53667 CALM1P1-201ENST00000442082 433 ntBASIC2.57□□□□□ -2
LIMK1P53667 MRPL50P4-201ENST00000446432 475 ntBASIC2.57□□□□□ -2
LIMK1P53667 PSPHP1-201ENST00000450062 261 ntBASIC2.57□□□□□ -2
LIMK1P53667 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.57□□□□□ -2
LIMK1P53667 AP000705.1-201ENST00000454567 350 ntBASIC2.57□□□□□ -2
LIMK1P53667 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.57□□□□□ -2
LIMK1P53667 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.57□□□□□ -2
LIMK1P53667 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.57□□□□□ -2
LIMK1P53667 HIF1AP1-201ENST00000553642 175 ntBASIC2.57□□□□□ -2
LIMK1P53667 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.57□□□□□ -2
LIMK1P53667 ZNF861P-201ENST00000588126 639 ntBASIC2.57□□□□□ -2
LIMK1P53667 AC012557.2-201ENST00000605919 418 ntBASIC2.57□□□□□ -2
LIMK1P53667 AC017083.3-201ENST00000609955 700 ntBASIC2.57□□□□□ -2
LIMK1P53667 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.57□□□□□ -2
LIMK1P53667 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.57□□□□□ -2
LIMK1P53667 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.57□□□□□ -2
LIMK1P53667 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.56□□□□□ -2
LIMK1P53667 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
LIMK1P53667 SNORD62.1-201ENST00000362541 86 ntBASIC2.56□□□□□ -2
LIMK1P53667 SNORD114-1-201ENST00000362705 72 ntBASIC2.56□□□□□ -2
LIMK1P53667 RNU6-486P-201ENST00000363116 107 ntBASIC2.56□□□□□ -2
LIMK1P53667 RNU6-1322P-201ENST00000364309 107 ntBASIC2.56□□□□□ -2
LIMK1P53667 Y_RNA.255-201ENST00000364581 97 ntBASIC2.56□□□□□ -2
LIMK1P53667 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LIMK1P53667 SNORD116-20-201ENST00000384529 92 ntBASIC2.56□□□□□ -2
LIMK1P53667 CIR1P3-201ENST00000405137 479 ntBASIC2.56□□□□□ -2
LIMK1P53667 U6atac.2-201ENST00000408644 118 ntBASIC2.56□□□□□ -2
LIMK1P53667 RNU6-607P-201ENST00000411283 108 ntBASIC2.56□□□□□ -2
LIMK1P53667 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.56□□□□□ -2
LIMK1P53667 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.56□□□□□ -2
LIMK1P53667 AC112220.1-201ENST00000434628 355 ntBASIC2.56□□□□□ -2
LIMK1P53667 HMGB1P31-201ENST00000437242 427 ntBASIC2.56□□□□□ -2
LIMK1P53667 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.56□□□□□ -2
LIMK1P53667 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.56□□□□□ -2
LIMK1P53667 AC112771.1-201ENST00000463581 102 ntBASIC2.56□□□□□ -2
LIMK1P53667 MED28P2-201ENST00000475771 317 ntBASIC2.56□□□□□ -2
LIMK1P53667 SNORA9.3-201ENST00000516383 129 ntBASIC2.56□□□□□ -2
LIMK1P53667 RNU6-314P-201ENST00000516574 104 ntBASIC2.56□□□□□ -2
LIMK1P53667 MTND4P7-201ENST00000523876 130 ntBASIC2.56□□□□□ -2
LIMK1P53667 AL137161.1-201ENST00000532231 390 ntBASIC2.56□□□□□ -2
LIMK1P53667 AC078795.2-201ENST00000602835 1252 ntBASIC2.56□□□□□ -2
LIMK1P53667 AC005046.1-201ENST00000608515 625 ntBASIC2.56□□□□□ -2
LIMK1P53667 AC096772.1-201ENST00000609146 564 ntBASIC2.56□□□□□ -2
LIMK1P53667 AC010378.1-201ENST00000619270 362 ntBASIC2.56□□□□□ -2
LIMK1P53667 MIR3529-201ENST00000637713 78 ntBASIC2.56□□□□□ -2
LIMK1P53667 AC092881.1-201ENST00000638218 2733 ntBASIC2.56□□□□□ -2
LIMK1P53667 AC006020.1-201ENST00000420179 1854 ntBASIC2.56□□□□□ -2
LIMK1P53667 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LIMK1P53667 Z75746.1-201ENST00000440243 2080 ntBASIC2.56□□□□□ -2
LIMK1P53667 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LIMK1P53667 RNA5SP99-201ENST00000364020 114 ntBASIC2.55□□□□□ -2
LIMK1P53667 Y_RNA.324-201ENST00000365165 102 ntBASIC2.55□□□□□ -2
LIMK1P53667 RNU6-1127P-201ENST00000384580 107 ntBASIC2.55□□□□□ -2
LIMK1P53667 AC097463.2-201ENST00000421074 142 ntBASIC2.55□□□□□ -2
LIMK1P53667 AL669831.1-202ENST00000428504 417 ntBASIC2.55□□□□□ -2
LIMK1P53667 AL589823.1-201ENST00000429577 183 ntBASIC2.55□□□□□ -2
LIMK1P53667 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.55□□□□□ -2
LIMK1P53667 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.55□□□□□ -2
LIMK1P53667 GTF2IP13-201ENST00000438487 386 ntBASIC2.55□□□□□ -2
LIMK1P53667 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.55□□□□□ -2
LIMK1P53667 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.55□□□□□ -2
LIMK1P53667 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.55□□□□□ -2
LIMK1P53667 AC003982.1-202ENST00000469928 248 ntBASIC2.55□□□□□ -2
LIMK1P53667 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
LIMK1P53667 RNA5SP320-201ENST00000516263 124 ntBASIC2.55□□□□□ -2
LIMK1P53667 RNU5B-3P-201ENST00000516601 115 ntBASIC2.55□□□□□ -2
LIMK1P53667 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.55□□□□□ -2
LIMK1P53667 AP001893.2-201ENST00000526949 202 ntBASIC2.55□□□□□ -2
LIMK1P53667 AP005435.4-201ENST00000529514 284 ntBASIC2.55□□□□□ -2
LIMK1P53667 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.55□□□□□ -2
LIMK1P53667 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.55□□□□□ -2
LIMK1P53667 SNORD14A-201ENST00000606526 91 ntBASIC2.55□□□□□ -2
LIMK1P53667 AC004492.1-201ENST00000607036 742 ntBASIC2.55□□□□□ -2
LIMK1P53667 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
LIMK1P53667 MIR6895-201ENST00000613497 78 ntBASIC2.55□□□□□ -2
LIMK1P53667 AL353997.5-201ENST00000618886 171 ntBASIC2.55□□□□□ -2
LIMK1P53667 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
LIMK1P53667 RNU6-527P-201ENST00000363425 104 ntBASIC2.54□□□□□ -2
LIMK1P53667 RNU6-1303P-201ENST00000364841 107 ntBASIC2.54□□□□□ -2
LIMK1P53667 RNU5E-7P-201ENST00000365290 117 ntBASIC2.54□□□□□ -2
LIMK1P53667 SNORA6-201ENST00000384033 151 ntBASIC2.54□□□□□ -2
LIMK1P53667 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.54□□□□□ -2
LIMK1P53667 UBE2V1P10-201ENST00000414685 269 ntBASIC2.54□□□□□ -2
LIMK1P53667 RPLP0P7-201ENST00000416050 667 ntBASIC2.54□□□□□ -2
LIMK1P53667 RPS12P2-201ENST00000439728 269 ntBASIC2.54□□□□□ -2
LIMK1P53667 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.54□□□□□ -2
LIMK1P53667 AC073415.1-201ENST00000449240 153 ntBASIC2.54□□□□□ -2
LIMK1P53667 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.54□□□□□ -2
LIMK1P53667 CKS1BP2-201ENST00000497342 240 ntBASIC2.54□□□□□ -2
LIMK1P53667 RPS27P27-201ENST00000498779 255 ntBASIC2.54□□□□□ -2
LIMK1P53667 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.54□□□□□ -2
LIMK1P53667 AC009646.1-201ENST00000510455 318 ntBASIC2.54□□□□□ -2
LIMK1P53667 RNA5SP401-201ENST00000515920 127 ntBASIC2.54□□□□□ -2
LIMK1P53667 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.54□□□□□ -2
LIMK1P53667 AL512360.1-201ENST00000555346 234 ntBASIC2.54□□□□□ -2
LIMK1P53667 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.54□□□□□ -2
LIMK1P53667 RPS3AP23-202ENST00000574601 686 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms