Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 Y_RNA.86-201ENST00000363020 111 ntBASIC3.18□□□□□ -1.9
NEK3P51956 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.18□□□□□ -1.9
NEK3P51956 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NEK3P51956 AL445529.1-201ENST00000398713 389 ntBASIC3.18□□□□□ -1.9
NEK3P51956 RNU6-293P-201ENST00000411259 106 ntBASIC3.18□□□□□ -1.9
NEK3P51956 NUP35P1-201ENST00000422734 947 ntBASIC3.18□□□□□ -1.9
NEK3P51956 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.18□□□□□ -1.9
NEK3P51956 AC243964.1-201ENST00000441814 261 ntBASIC3.18□□□□□ -1.9
NEK3P51956 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.18□□□□□ -1.9
NEK3P51956 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.18□□□□□ -1.9
NEK3P51956 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.18□□□□□ -1.9
NEK3P51956 AC010486.1-201ENST00000511793 424 ntBASIC3.18□□□□□ -1.9
NEK3P51956 RNA5SP341-201ENST00000516261 117 ntBASIC3.18□□□□□ -1.9
NEK3P51956 RNU6-1332P-201ENST00000516666 104 ntBASIC3.18□□□□□ -1.9
NEK3P51956 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.18□□□□□ -1.9
NEK3P51956 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.18□□□□□ -1.9
NEK3P51956 AP000889.2-201ENST00000532684 490 ntBASIC3.18□□□□□ -1.9
NEK3P51956 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.18□□□□□ -1.9
NEK3P51956 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.18□□□□□ -1.9
NEK3P51956 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
NEK3P51956 AC103996.1-201ENST00000555468 102 ntBASIC3.18□□□□□ -1.9
NEK3P51956 MIR4506-201ENST00000584693 77 ntBASIC3.18□□□□□ -1.9
NEK3P51956 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NEK3P51956 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
NEK3P51956 MIR422A-201ENST00000362286 90 ntBASIC3.17□□□□□ -1.9
NEK3P51956 SNORD73A-201ENST00000386062 65 ntBASIC3.17□□□□□ -1.9
NEK3P51956 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NEK3P51956 AL356776.1-201ENST00000406574 447 ntBASIC3.17□□□□□ -1.9
NEK3P51956 RN7SKP123-201ENST00000410732 291 ntBASIC3.17□□□□□ -1.9
NEK3P51956 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.17□□□□□ -1.9
NEK3P51956 RPL30P16-201ENST00000419341 429 ntBASIC3.17□□□□□ -1.9
NEK3P51956 EIF4EP4-201ENST00000424916 578 ntBASIC3.17□□□□□ -1.9
NEK3P51956 SNAP23P1-201ENST00000433229 246 ntBASIC3.17□□□□□ -1.9
NEK3P51956 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.17□□□□□ -1.9
NEK3P51956 USP9YP28-201ENST00000435142 589 ntBASIC3.17□□□□□ -1.9
NEK3P51956 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NEK3P51956 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.17□□□□□ -1.9
NEK3P51956 MTND4LP16-201ENST00000440828 295 ntBASIC3.17□□□□□ -1.9
NEK3P51956 RPL7P12-201ENST00000446719 750 ntBASIC3.17□□□□□ -1.9
NEK3P51956 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.17□□□□□ -1.9
NEK3P51956 U8.21-201ENST00000459536 136 ntBASIC3.17□□□□□ -1.9
NEK3P51956 RPS26P21-201ENST00000475397 348 ntBASIC3.17□□□□□ -1.9
NEK3P51956 AF213884.2-201ENST00000510417 903 ntBASIC3.17□□□□□ -1.9
NEK3P51956 RNU6-864P-201ENST00000516256 108 ntBASIC3.17□□□□□ -1.9
NEK3P51956 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.17□□□□□ -1.9
NEK3P51956 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.17□□□□□ -1.9
NEK3P51956 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.17□□□□□ -1.9
NEK3P51956 SCOCP1-201ENST00000554676 349 ntBASIC3.17□□□□□ -1.9
NEK3P51956 UBL5P2-201ENST00000583788 219 ntBASIC3.17□□□□□ -1.9
NEK3P51956 AC023043.2-201ENST00000589678 1026 ntBASIC3.17□□□□□ -1.9
NEK3P51956 AL138726.1-201ENST00000614873 333 ntBASIC3.17□□□□□ -1.9
NEK3P51956 AL159153.1-201ENST00000619688 317 ntBASIC3.17□□□□□ -1.9
NEK3P51956 AL136221.1-201ENST00000621449 509 ntBASIC3.17□□□□□ -1.9
NEK3P51956 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
NEK3P51956 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NEK3P51956 Y_RNA.135-201ENST00000363439 95 ntBASIC3.16□□□□□ -1.9
NEK3P51956 MIR186-201ENST00000384988 86 ntBASIC3.16□□□□□ -1.9
NEK3P51956 NDUFB4P4-201ENST00000404822 243 ntBASIC3.16□□□□□ -1.9
NEK3P51956 AL138885.1-201ENST00000405921 675 ntBASIC3.16□□□□□ -1.9
NEK3P51956 MTCO3P46-201ENST00000425787 232 ntBASIC3.16□□□□□ -1.9
NEK3P51956 RPL39P29-201ENST00000447779 157 ntBASIC3.16□□□□□ -1.9
NEK3P51956 AC018710.1-201ENST00000506509 158 ntBASIC3.16□□□□□ -1.9
NEK3P51956 AC092436.3-201ENST00000511788 257 ntBASIC3.16□□□□□ -1.9
NEK3P51956 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.16□□□□□ -1.9
NEK3P51956 AC087241.2-201ENST00000535801 324 ntBASIC3.16□□□□□ -1.9
NEK3P51956 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.16□□□□□ -1.9
NEK3P51956 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.16□□□□□ -1.9
NEK3P51956 AC091135.1-201ENST00000585943 307 ntBASIC3.16□□□□□ -1.9
NEK3P51956 ELOCP5-201ENST00000604924 333 ntBASIC3.16□□□□□ -1.9
NEK3P51956 MIR622-201ENST00000638396 96 ntBASIC3.16□□□□□ -1.9
NEK3P51956 AP000560.1-201ENST00000624150 1937 ntBASIC3.16□□□□□ -1.9
NEK3P51956 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NEK3P51956 CASC19-280ENST00000642102 1351 ntBASIC3.15□□□□□ -1.9
NEK3P51956 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
NEK3P51956 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.15□□□□□ -1.91
NEK3P51956 RNU6-1141P-201ENST00000364520 107 ntBASIC3.15□□□□□ -1.91
NEK3P51956 MIR544A-201ENST00000384855 91 ntBASIC3.15□□□□□ -1.91
NEK3P51956 AP000275.1-201ENST00000411943 390 ntBASIC3.15□□□□□ -1.91
NEK3P51956 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.15□□□□□ -1.91
NEK3P51956 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.15□□□□□ -1.91
NEK3P51956 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.15□□□□□ -1.91
NEK3P51956 MTCO1P29-201ENST00000496868 288 ntBASIC3.15□□□□□ -1.91
NEK3P51956 AC096745.1-201ENST00000509945 370 ntBASIC3.15□□□□□ -1.91
NEK3P51956 AC046134.1-201ENST00000514454 666 ntBASIC3.15□□□□□ -1.91
NEK3P51956 RN7SKP43-201ENST00000516173 320 ntBASIC3.15□□□□□ -1.91
NEK3P51956 AP002404.1-201ENST00000532005 451 ntBASIC3.15□□□□□ -1.91
NEK3P51956 HSPE1P20-201ENST00000538133 289 ntBASIC3.15□□□□□ -1.91
NEK3P51956 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.15□□□□□ -1.91
NEK3P51956 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.15□□□□□ -1.91
NEK3P51956 AC090616.3-201ENST00000582184 217 ntBASIC3.15□□□□□ -1.91
NEK3P51956 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.15□□□□□ -1.91
NEK3P51956 AC011712.1-201ENST00000588959 234 ntBASIC3.15□□□□□ -1.91
NEK3P51956 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.15□□□□□ -1.91
NEK3P51956 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.15□□□□□ -1.91
NEK3P51956 AC064836.2-201ENST00000609491 462 ntBASIC3.15□□□□□ -1.91
NEK3P51956 AC241585.2-209ENST00000638217 143 ntBASIC3.15□□□□□ -1.91
NEK3P51956 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
NEK3P51956 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NEK3P51956 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NEK3P51956 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms