Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.42□□□□□ -1.7
RNF144AP50876 FAM27B-201ENST00000610601 213 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 AC100827.5-201ENST00000615883 426 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 AL445567.2-201ENST00000618935 498 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 AL773545.4-201ENST00000637262 310 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 AL513478.4-201ENST00000641636 310 ntBASIC4.42□□□□□ -1.7
RNF144AP50876 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.42□□□□□ -1.7
RNF144AP50876 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.42□□□□□ -1.7
RNF144AP50876 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF144AP50876 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF144AP50876 AL136964.1-201ENST00000622038 2990 ntBASIC4.41□□□□□ -1.7
RNF144AP50876 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNF144AP50876 RNU1-83P-201ENST00000363426 164 ntBASIC4.41□□□□□ -1.7
RNF144AP50876 SNORD115-30-201ENST00000364117 82 ntBASIC4.41□□□□□ -1.7
RNF144AP50876 Y_RNA.341-201ENST00000365341 102 ntBASIC4.41□□□□□ -1.7
RNF144AP50876 Y_RNA.393-201ENST00000383936 102 ntBASIC4.41□□□□□ -1.7
RNF144AP50876 RNU6-855P-201ENST00000410395 104 ntBASIC4.41□□□□□ -1.7
RNF144AP50876 COX6B1P1-201ENST00000415962 213 ntBASIC4.41□□□□□ -1.7
RNF144AP50876 AC099548.1-201ENST00000421443 426 ntBASIC4.41□□□□□ -1.7
RNF144AP50876 AL590762.4-201ENST00000425885 253 ntBASIC4.41□□□□□ -1.7
RNF144AP50876 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.41□□□□□ -1.7
RNF144AP50876 RPL12P3-201ENST00000440080 396 ntBASIC4.41□□□□□ -1.7
RNF144AP50876 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNF144AP50876 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNF144AP50876 AC103975.1-201ENST00000482506 483 ntBASIC4.41□□□□□ -1.7
RNF144AP50876 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.41□□□□□ -1.7
RNF144AP50876 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.41□□□□□ -1.7
RNF144AP50876 AP001880.2-201ENST00000538233 448 ntBASIC4.41□□□□□ -1.7
RNF144AP50876 AC008033.2-201ENST00000542626 177 ntBASIC4.41□□□□□ -1.7
RNF144AP50876 RN7SL176P-201ENST00000580352 264 ntBASIC4.41□□□□□ -1.7
RNF144AP50876 MIR5688-201ENST00000580619 83 ntBASIC4.41□□□□□ -1.7
RNF144AP50876 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.41□□□□□ -1.7
RNF144AP50876 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.41□□□□□ -1.7
RNF144AP50876 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
RNF144AP50876 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNF144AP50876 AL136164.3-201ENST00000624429 3978 ntBASIC4.41□□□□□ -1.7
RNF144AP50876 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RNF144AP50876 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RNF144AP50876 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RNF144AP50876 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RNF144AP50876 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RNF144AP50876 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
RNF144AP50876 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF144AP50876 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.4□□□□□ -1.7
RNF144AP50876 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF144AP50876 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.4□□□□□ -1.7
RNF144AP50876 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RNF144AP50876 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.4□□□□□ -1.7
RNF144AP50876 RNU6-235P-201ENST00000362644 107 ntBASIC4.4□□□□□ -1.71
RNF144AP50876 EI24P2-201ENST00000397776 1076 ntBASIC4.4□□□□□ -1.71
RNF144AP50876 RNA5SP89-201ENST00000410300 108 ntBASIC4.4□□□□□ -1.71
RNF144AP50876 AL645608.4-201ENST00000423619 154 ntBASIC4.4□□□□□ -1.71
RNF144AP50876 RPS27P18-201ENST00000431701 247 ntBASIC4.4□□□□□ -1.71
RNF144AP50876 AL356535.1-201ENST00000440335 398 ntBASIC4.4□□□□□ -1.71
RNF144AP50876 AC083982.1-201ENST00000485679 344 ntBASIC4.4□□□□□ -1.71
RNF144AP50876 IGLV2-34-201ENST00000490007 283 ntBASIC4.4□□□□□ -1.71
RNF144AP50876 RPL30P5-201ENST00000494923 336 ntBASIC4.4□□□□□ -1.71
RNF144AP50876 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF144AP50876 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF144AP50876 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF144AP50876 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF144AP50876 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF144AP50876 MTND6P33-201ENST00000571794 183 ntBASIC4.4□□□□□ -1.71
RNF144AP50876 AC090897.2-201ENST00000581715 130 ntBASIC4.4□□□□□ -1.71
RNF144AP50876 AC022726.1-201ENST00000587475 207 ntBASIC4.4□□□□□ -1.71
RNF144AP50876 SNORD98-201ENST00000636377 67 ntBASIC4.4□□□□□ -1.71
RNF144AP50876 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
RNF144AP50876 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF144AP50876 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RNF144AP50876 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RNF144AP50876 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF144AP50876 AL133412.1-201ENST00000380194 2992 ntBASIC4.4□□□□□ -1.71
RNF144AP50876 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RNF144AP50876 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF144AP50876 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
RNF144AP50876 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RNF144AP50876 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF144AP50876 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF144AP50876 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
RNF144AP50876 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF144AP50876 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RNF144AP50876 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF144AP50876 AC106871.1-201ENST00000568324 3102 ntBASIC4.39□□□□□ -1.71
RNF144AP50876 RNY1P11-201ENST00000363759 113 ntBASIC4.39□□□□□ -1.71
RNF144AP50876 Y_RNA.229-201ENST00000364347 113 ntBASIC4.39□□□□□ -1.71
RNF144AP50876 Y_RNA.251-201ENST00000364551 99 ntBASIC4.39□□□□□ -1.71
RNF144AP50876 Y_RNA.368-201ENST00000365547 113 ntBASIC4.39□□□□□ -1.71
RNF144AP50876 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RNF144AP50876 U1.1-201ENST00000384101 164 ntBASIC4.39□□□□□ -1.71
RNF144AP50876 MIR493-201ENST00000385254 89 ntBASIC4.39□□□□□ -1.71
RNF144AP50876 AL645733.1-201ENST00000402250 217 ntBASIC4.39□□□□□ -1.71
RNF144AP50876 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF144AP50876 HSPE1P13-201ENST00000451143 297 ntBASIC4.39□□□□□ -1.71
RNF144AP50876 RNU7-141P-201ENST00000459304 62 ntBASIC4.39□□□□□ -1.71
RNF144AP50876 RN7SL826P-201ENST00000479724 288 ntBASIC4.39□□□□□ -1.71
RNF144AP50876 AC231760.1-201ENST00000498002 260 ntBASIC4.39□□□□□ -1.71
RNF144AP50876 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF144AP50876 RNU6-1073P-201ENST00000517182 106 ntBASIC4.39□□□□□ -1.71
RNF144AP50876 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.39□□□□□ -1.71
RNF144AP50876 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms