Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.5□□□□□ -2.01
LHX1P48742 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.5□□□□□ -2.01
LHX1P48742 DYNLL1P5-201ENST00000467158 270 ntBASIC2.5□□□□□ -2.01
LHX1P48742 MTCO3P38-201ENST00000468910 766 ntBASIC2.5□□□□□ -2.01
LHX1P48742 RPL36AP48-201ENST00000485521 314 ntBASIC2.5□□□□□ -2.01
LHX1P48742 RNA5SP112-201ENST00000515937 99 ntBASIC2.5□□□□□ -2.01
LHX1P48742 SNORA25.17-201ENST00000517184 124 ntBASIC2.5□□□□□ -2.01
LHX1P48742 RN7SKP40-201ENST00000517211 242 ntBASIC2.5□□□□□ -2.01
LHX1P48742 CR383656.8-201ENST00000549046 145 ntBASIC2.5□□□□□ -2.01
LHX1P48742 AL157687.1-201ENST00000554853 619 ntBASIC2.5□□□□□ -2.01
LHX1P48742 AC091544.4-201ENST00000555268 342 ntBASIC2.5□□□□□ -2.01
LHX1P48742 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.5□□□□□ -2.01
LHX1P48742 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.5□□□□□ -2.01
LHX1P48742 TPRKBP2-201ENST00000565969 475 ntBASIC2.5□□□□□ -2.01
LHX1P48742 MIR5007-201ENST00000583098 95 ntBASIC2.5□□□□□ -2.01
LHX1P48742 MIR3616-201ENST00000584070 92 ntBASIC2.5□□□□□ -2.01
LHX1P48742 AC068790.6-201ENST00000602558 258 ntBASIC2.5□□□□□ -2.01
LHX1P48742 RMST_7.1-201ENST00000621935 268 ntBASIC2.5□□□□□ -2.01
LHX1P48742 AC098679.4-201ENST00000624241 654 ntBASIC2.5□□□□□ -2.01
LHX1P48742 AC064859.1-201ENST00000624741 174 ntBASIC2.5□□□□□ -2.01
LHX1P48742 Z69720.2-201ENST00000624755 279 ntBASIC2.5□□□□□ -2.01
LHX1P48742 MIR7157-201ENST00000635801 60 ntBASIC2.5□□□□□ -2.01
LHX1P48742 MIR1321-201ENST00000637766 79 ntBASIC2.5□□□□□ -2.01
LHX1P48742 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
LHX1P48742 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
LHX1P48742 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
LHX1P48742 RBBP8P1-201ENST00000449447 1844 ntBASIC2.49□□□□□ -2.01
LHX1P48742 Y_RNA.9-201ENST00000362354 101 ntBASIC2.49□□□□□ -2.01
LHX1P48742 RNU6-37P-201ENST00000362692 107 ntBASIC2.49□□□□□ -2.01
LHX1P48742 RNU6-78P-201ENST00000362897 107 ntBASIC2.49□□□□□ -2.01
LHX1P48742 RNU6-486P-201ENST00000363116 107 ntBASIC2.49□□□□□ -2.01
LHX1P48742 RNU6-11P-201ENST00000364234 107 ntBASIC2.49□□□□□ -2.01
LHX1P48742 RNU6-25P-201ENST00000383873 107 ntBASIC2.49□□□□□ -2.01
LHX1P48742 RNU6-1-201ENST00000383898 107 ntBASIC2.49□□□□□ -2.01
LHX1P48742 RNU6-48P-201ENST00000384161 107 ntBASIC2.49□□□□□ -2.01
LHX1P48742 RNU6-36P-201ENST00000384172 107 ntBASIC2.49□□□□□ -2.01
LHX1P48742 RNU6-4P-201ENST00000384205 107 ntBASIC2.49□□□□□ -2.01
LHX1P48742 RNU6-5P-201ENST00000384238 107 ntBASIC2.49□□□□□ -2.01
LHX1P48742 RNU6-3P-201ENST00000384314 107 ntBASIC2.49□□□□□ -2.01
LHX1P48742 RNU6-16P-201ENST00000384385 107 ntBASIC2.49□□□□□ -2.01
LHX1P48742 RNU6-843P-201ENST00000384454 104 ntBASIC2.49□□□□□ -2.01
LHX1P48742 RNU6-15P-201ENST00000384534 107 ntBASIC2.49□□□□□ -2.01
LHX1P48742 RNU6-2-201ENST00000384627 107 ntBASIC2.49□□□□□ -2.01
LHX1P48742 RNU6-29P-201ENST00000384637 107 ntBASIC2.49□□□□□ -2.01
LHX1P48742 RNU6-9-201ENST00000384776 107 ntBASIC2.49□□□□□ -2.01
LHX1P48742 RNU6-33P-201ENST00000384793 107 ntBASIC2.49□□□□□ -2.01
LHX1P48742 MIR218-1-201ENST00000384999 110 ntBASIC2.49□□□□□ -2.01
LHX1P48742 RNA5SP219-201ENST00000390940 113 ntBASIC2.49□□□□□ -2.01
LHX1P48742 OR9R1P-201ENST00000412200 877 ntBASIC2.49□□□□□ -2.01
LHX1P48742 MTCO1P21-201ENST00000416634 589 ntBASIC2.49□□□□□ -2.01
LHX1P48742 USP9YP27-201ENST00000418455 438 ntBASIC2.49□□□□□ -2.01
LHX1P48742 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.49□□□□□ -2.01
LHX1P48742 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.49□□□□□ -2.01
LHX1P48742 AL445687.1-201ENST00000439946 251 ntBASIC2.49□□□□□ -2.01
LHX1P48742 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.49□□□□□ -2.01
LHX1P48742 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.49□□□□□ -2.01
LHX1P48742 AC023141.11-201ENST00000508864 202 ntBASIC2.49□□□□□ -2.01
LHX1P48742 TBCAP3-201ENST00000512475 312 ntBASIC2.49□□□□□ -2.01
LHX1P48742 SCARNA3-201ENST00000517097 143 ntBASIC2.49□□□□□ -2.01
LHX1P48742 AC069113.1-201ENST00000517763 267 ntBASIC2.49□□□□□ -2.01
LHX1P48742 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.49□□□□□ -2.01
LHX1P48742 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.49□□□□□ -2.01
LHX1P48742 AL138976.2-201ENST00000563989 694 ntBASIC2.49□□□□□ -2.01
LHX1P48742 AC105137.2-201ENST00000569073 466 ntBASIC2.49□□□□□ -2.01
LHX1P48742 MIR3670-2-201ENST00000582974 65 ntBASIC2.49□□□□□ -2.01
LHX1P48742 MIR3670-1-201ENST00000584160 65 ntBASIC2.49□□□□□ -2.01
LHX1P48742 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.49□□□□□ -2.01
LHX1P48742 MIR3670-3-201ENST00000584855 65 ntBASIC2.49□□□□□ -2.01
LHX1P48742 AL356280.1-201ENST00000603614 379 ntBASIC2.49□□□□□ -2.01
LHX1P48742 RNU6-6P-201ENST00000606623 107 ntBASIC2.49□□□□□ -2.01
LHX1P48742 MIR3670-4-201ENST00000612260 65 ntBASIC2.49□□□□□ -2.01
LHX1P48742 U4.5-201ENST00000617137 123 ntBASIC2.49□□□□□ -2.01
LHX1P48742 AC005858.4-201ENST00000623191 700 ntBASIC2.49□□□□□ -2.01
LHX1P48742 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.49□□□□□ -2.01
LHX1P48742 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
LHX1P48742 HAUS6P2-201ENST00000433254 2404 ntBASIC2.49□□□□□ -2.01
LHX1P48742 MTND4P27-201ENST00000450813 1354 ntBASIC2.49□□□□□ -2.01
LHX1P48742 MIR21-201ENST00000362134 72 ntBASIC2.48□□□□□ -2.01
LHX1P48742 Y_RNA.6-201ENST00000362350 114 ntBASIC2.48□□□□□ -2.01
LHX1P48742 RNU6-38P-201ENST00000384085 107 ntBASIC2.48□□□□□ -2.01
LHX1P48742 Y_RNA.554-201ENST00000384672 102 ntBASIC2.48□□□□□ -2.01
LHX1P48742 RNU6-1068P-201ENST00000410958 103 ntBASIC2.48□□□□□ -2.01
LHX1P48742 AL135786.1-201ENST00000415892 214 ntBASIC2.48□□□□□ -2.01
LHX1P48742 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.48□□□□□ -2.01
LHX1P48742 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.48□□□□□ -2.01
LHX1P48742 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.48□□□□□ -2.01
LHX1P48742 RPL32P28-201ENST00000443577 397 ntBASIC2.48□□□□□ -2.01
LHX1P48742 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.48□□□□□ -2.01
LHX1P48742 MTND3P16-201ENST00000452205 344 ntBASIC2.48□□□□□ -2.01
LHX1P48742 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.48□□□□□ -2.01
LHX1P48742 RNU6-333P-201ENST00000459117 107 ntBASIC2.48□□□□□ -2.01
LHX1P48742 AC112771.1-201ENST00000463581 102 ntBASIC2.48□□□□□ -2.01
LHX1P48742 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.48□□□□□ -2.01
LHX1P48742 SNORA25.11-201ENST00000515935 105 ntBASIC2.48□□□□□ -2.01
LHX1P48742 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.48□□□□□ -2.01
LHX1P48742 RNA5SP281-201ENST00000516504 135 ntBASIC2.48□□□□□ -2.01
LHX1P48742 RNU6-1038P-201ENST00000516516 104 ntBASIC2.48□□□□□ -2.01
LHX1P48742 SNORD60.2-201ENST00000516883 86 ntBASIC2.48□□□□□ -2.01
LHX1P48742 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LHX1P48742 CENPUP1-201ENST00000526649 1202 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms