Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.66□□□□□ -1.98
MTHFRP42898 AC087045.1-201ENST00000605856 382 ntBASIC2.66□□□□□ -1.98
MTHFRP42898 AC005046.1-201ENST00000608515 625 ntBASIC2.66□□□□□ -1.98
MTHFRP42898 U6atac.1-201ENST00000616025 117 ntBASIC2.66□□□□□ -1.98
MTHFRP42898 AC010378.1-201ENST00000619270 362 ntBASIC2.66□□□□□ -1.98
MTHFRP42898 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.66□□□□□ -1.98
MTHFRP42898 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.66□□□□□ -1.98
MTHFRP42898 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 Y_RNA.255-201ENST00000364581 97 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 Y_RNA.372-201ENST00000365599 102 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 RNU6-72P-201ENST00000384285 79 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 RNU6-1127P-201ENST00000384580 107 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 MIR181A1-201ENST00000385026 110 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 MIR147B-201ENST00000390185 80 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
MTHFRP42898 SNORD70.1-201ENST00000391007 85 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.65□□□□□ -1.99
MTHFRP42898 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.65□□□□□ -1.99
MTHFRP42898 USP9YP18-201ENST00000425912 695 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
MTHFRP42898 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.65□□□□□ -1.99
MTHFRP42898 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.65□□□□□ -1.99
MTHFRP42898 RBMX2P4-201ENST00000441256 376 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 AC016691.1-201ENST00000441321 413 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 AC011816.1-201ENST00000441346 546 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 AL139109.1-201ENST00000455491 297 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
MTHFRP42898 AL441985.1-201ENST00000457727 251 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 SCARNA18-201ENST00000459004 134 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 AL121769.1-201ENST00000469473 401 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 AC011005.2-201ENST00000487324 359 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 AC009646.1-201ENST00000510455 318 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.65□□□□□ -1.99
MTHFRP42898 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.65□□□□□ -1.99
MTHFRP42898 SCARNA3-201ENST00000517097 143 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.65□□□□□ -1.99
MTHFRP42898 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.65□□□□□ -1.99
MTHFRP42898 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.65□□□□□ -1.99
MTHFRP42898 AK6P1-201ENST00000540219 478 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 ZNF519P2-201ENST00000557032 169 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 MIR3199-1-201ENST00000582434 88 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 MIR4801-201ENST00000582704 82 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.65□□□□□ -1.99
MTHFRP42898 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 AC131280.1-202ENST00000624067 4211 ntBASIC2.65□□□□□ -1.99
MTHFRP42898 MTND4P14-201ENST00000435799 1354 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 RNU6-1322P-201ENST00000364309 107 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
MTHFRP42898 RNU6-393P-201ENST00000384475 107 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 RNU6-220P-201ENST00000390919 107 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 SNORA16.2-201ENST00000390991 127 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 FTH1P15-201ENST00000406984 280 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 U3.37-201ENST00000408528 213 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.64□□□□□ -1.99
MTHFRP42898 CYCSP33-201ENST00000414485 327 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 USP9YP20-201ENST00000419224 558 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.64□□□□□ -1.99
MTHFRP42898 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.64□□□□□ -1.99
MTHFRP42898 AC080013.2-201ENST00000460866 323 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 AC133134.1-201ENST00000466800 359 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 AC083798.1-201ENST00000472671 131 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.64□□□□□ -1.99
MTHFRP42898 AC090096.1-201ENST00000489168 390 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.64□□□□□ -1.99
MTHFRP42898 AC074344.1-201ENST00000512823 224 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 Y_RNA.687-201ENST00000516558 91 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 RNU6-314P-201ENST00000516574 104 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 RNA5SP82-201ENST00000516707 92 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.64□□□□□ -1.99
MTHFRP42898 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.64□□□□□ -1.99
MTHFRP42898 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.64□□□□□ -1.99
MTHFRP42898 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.64□□□□□ -1.99
MTHFRP42898 MIR4658-201ENST00000584344 65 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 MIR4765-201ENST00000585007 77 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 AC008121.1-201ENST00000603244 268 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 RMST_4.1-201ENST00000616886 107 ntBASIC2.64□□□□□ -1.99
MTHFRP42898 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
MTHFRP42898 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
MTHFRP42898 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
MTHFRP42898 AL359854.1-201ENST00000614203 1594 ntBASIC2.63□□□□□ -1.99
MTHFRP42898 RNU6-858P-201ENST00000362436 107 ntBASIC2.63□□□□□ -1.99
MTHFRP42898 Y_RNA.248-201ENST00000364501 109 ntBASIC2.63□□□□□ -1.99
MTHFRP42898 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
MTHFRP42898 SNORA69-201ENST00000383895 132 ntBASIC2.63□□□□□ -1.99
MTHFRP42898 RNU1-52P-201ENST00000384190 164 ntBASIC2.63□□□□□ -1.99
MTHFRP42898 RNU6-748P-201ENST00000384648 107 ntBASIC2.63□□□□□ -1.99
MTHFRP42898 AL359511.1-201ENST00000402970 211 ntBASIC2.63□□□□□ -1.99
MTHFRP42898 CIR1P3-201ENST00000405137 479 ntBASIC2.63□□□□□ -1.99
MTHFRP42898 RNU2-3P-201ENST00000410144 191 ntBASIC2.63□□□□□ -1.99
MTHFRP42898 RNU6-607P-201ENST00000411283 108 ntBASIC2.63□□□□□ -1.99
MTHFRP42898 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.63□□□□□ -1.99
MTHFRP42898 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
MTHFRP42898 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.63□□□□□ -1.99
MTHFRP42898 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.63□□□□□ -1.99
MTHFRP42898 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.63□□□□□ -1.99
MTHFRP42898 AC004383.1-201ENST00000438135 289 ntBASIC2.63□□□□□ -1.99
MTHFRP42898 CALM1P1-201ENST00000442082 433 ntBASIC2.63□□□□□ -1.99
MTHFRP42898 PRPS1P1-201ENST00000445305 876 ntBASIC2.63□□□□□ -1.99
MTHFRP42898 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms