Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC244636.1-201ENST00000421152 228 ntBASIC1.8□□□□□ -2.12
FDFT1P37268 OOSP1P1-201ENST00000423265 274 ntBASIC1.8□□□□□ -2.12
FDFT1P37268 ISCA1P6-201ENST00000427740 390 ntBASIC1.8□□□□□ -2.12
FDFT1P37268 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.8□□□□□ -2.12
FDFT1P37268 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.8□□□□□ -2.12
FDFT1P37268 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.8□□□□□ -2.12
FDFT1P37268 AC003989.2-201ENST00000440224 169 ntBASIC1.8□□□□□ -2.12
FDFT1P37268 RPL23AP6-201ENST00000446637 472 ntBASIC1.8□□□□□ -2.12
FDFT1P37268 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.8□□□□□ -2.12
FDFT1P37268 AC006026.2-201ENST00000457376 180 ntBASIC1.8□□□□□ -2.12
FDFT1P37268 RPS29P21-201ENST00000496272 170 ntBASIC1.8□□□□□ -2.12
FDFT1P37268 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.8□□□□□ -2.12
FDFT1P37268 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.8□□□□□ -2.12
FDFT1P37268 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.8□□□□□ -2.12
FDFT1P37268 MIR3915-201ENST00000578518 97 ntBASIC1.8□□□□□ -2.12
FDFT1P37268 AC090578.1-201ENST00000604955 591 ntBASIC1.8□□□□□ -2.12
FDFT1P37268 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.8□□□□□ -2.12
FDFT1P37268 AC091304.6-201ENST00000619761 202 ntBASIC1.8□□□□□ -2.12
FDFT1P37268 AC090517.3-201ENST00000625170 141 ntBASIC1.8□□□□□ -2.12
FDFT1P37268 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.8□□□□□ -2.12
FDFT1P37268 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.8□□□□□ -2.12
FDFT1P37268 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
FDFT1P37268 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.79□□□□□ -2.12
FDFT1P37268 SNORD48-201ENST00000364953 64 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 RNU6-116P-201ENST00000384042 109 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 SNORA8-201ENST00000384574 139 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 MIR9-3-201ENST00000385084 90 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
FDFT1P37268 SNORA40.3-201ENST00000390964 122 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 RNU4-26P-201ENST00000410270 107 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 RNU6-387P-201ENST00000411331 105 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 CYCSP46-201ENST00000423569 204 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 AC000111.3-201ENST00000433478 193 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.79□□□□□ -2.12
FDFT1P37268 HMGB1P31-201ENST00000437242 427 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 AC104058.1-201ENST00000448028 297 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.79□□□□□ -2.12
FDFT1P37268 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
FDFT1P37268 ART2BP-201ENST00000453501 499 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 AC006512.1-201ENST00000468816 291 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 RPL23AP42-201ENST00000471152 471 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 AP001025.1-201ENST00000486139 332 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 RPS29P11-201ENST00000496507 171 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 AC104806.1-201ENST00000508720 308 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 RNU1-86P-201ENST00000516108 154 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 RNU1-107P-201ENST00000516617 154 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 SNORA43.2-201ENST00000516652 128 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 RNU6-667P-201ENST00000517186 102 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 SNORA31.23-201ENST00000517219 133 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.79□□□□□ -2.12
FDFT1P37268 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.79□□□□□ -2.12
FDFT1P37268 BNIP3P6-201ENST00000549284 499 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.79□□□□□ -2.12
FDFT1P37268 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.79□□□□□ -2.12
FDFT1P37268 AC026585.1-201ENST00000619582 524 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 AC093648.1-201ENST00000623546 606 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 AL603839.4-201ENST00000624658 1005 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 U6.114-201ENST00000636407 96 ntBASIC1.79□□□□□ -2.12
FDFT1P37268 RNU6-212P-201ENST00000362642 104 ntBASIC1.78□□□□□ -2.12
FDFT1P37268 RNU6-622P-201ENST00000384272 103 ntBASIC1.78□□□□□ -2.12
FDFT1P37268 RNA5SP465-201ENST00000391195 109 ntBASIC1.78□□□□□ -2.12
FDFT1P37268 AL356432.1-201ENST00000405809 419 ntBASIC1.78□□□□□ -2.12
FDFT1P37268 HMGN1P14-201ENST00000412459 517 ntBASIC1.78□□□□□ -2.12
FDFT1P37268 AC074117.2-201ENST00000417130 397 ntBASIC1.78□□□□□ -2.12
FDFT1P37268 MTCYBP5-201ENST00000423752 1135 ntBASIC1.78□□□□□ -2.12
FDFT1P37268 CALM2P2-201ENST00000428512 440 ntBASIC1.78□□□□□ -2.12
FDFT1P37268 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.78□□□□□ -2.12
FDFT1P37268 MTCO3P5-201ENST00000433620 714 ntBASIC1.78□□□□□ -2.12
FDFT1P37268 AL033528.1-201ENST00000453780 140 ntBASIC1.78□□□□□ -2.12
FDFT1P37268 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.78□□□□□ -2.12
FDFT1P37268 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.78□□□□□ -2.12
FDFT1P37268 RNU6-685P-201ENST00000517088 95 ntBASIC1.78□□□□□ -2.12
FDFT1P37268 AC090572.1-201ENST00000519251 160 ntBASIC1.78□□□□□ -2.12
FDFT1P37268 AP005639.2-201ENST00000527592 928 ntBASIC1.78□□□□□ -2.12
FDFT1P37268 AP000763.2-201ENST00000540641 163 ntBASIC1.78□□□□□ -2.12
FDFT1P37268 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.78□□□□□ -2.12
FDFT1P37268 AC137800.2-201ENST00000574375 120 ntBASIC1.78□□□□□ -2.12
FDFT1P37268 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.78□□□□□ -2.12
FDFT1P37268 MIR3945-201ENST00000581853 98 ntBASIC1.78□□□□□ -2.12
FDFT1P37268 AC098848.2-201ENST00000588023 330 ntBASIC1.78□□□□□ -2.12
FDFT1P37268 AC116312.1-201ENST00000606841 314 ntBASIC1.78□□□□□ -2.12
FDFT1P37268 AC138649.3-201ENST00000622154 254 ntBASIC1.78□□□□□ -2.12
FDFT1P37268 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
FDFT1P37268 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
FDFT1P37268 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
FDFT1P37268 RNU6-655P-201ENST00000362858 107 ntBASIC1.77□□□□□ -2.13
FDFT1P37268 SNORD56.1-201ENST00000362913 68 ntBASIC1.77□□□□□ -2.13
FDFT1P37268 SNORD115-7-201ENST00000365306 82 ntBASIC1.77□□□□□ -2.13
FDFT1P37268 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.77□□□□□ -2.13
FDFT1P37268 MIR583-201ENST00000384846 75 ntBASIC1.77□□□□□ -2.13
FDFT1P37268 MT-TH-201ENST00000387441 69 ntBASIC1.77□□□□□ -2.13
FDFT1P37268 RAP1BP3-201ENST00000407180 549 ntBASIC1.77□□□□□ -2.13
FDFT1P37268 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.77□□□□□ -2.13
FDFT1P37268 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.77□□□□□ -2.13
FDFT1P37268 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.77□□□□□ -2.13
FDFT1P37268 AL645568.3-201ENST00000433683 316 ntBASIC1.77□□□□□ -2.13
FDFT1P37268 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.77□□□□□ -2.13
FDFT1P37268 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.77□□□□□ -2.13
FDFT1P37268 AC092436.1-201ENST00000506450 503 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms