Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC016717.2-201ENST00000609089 5141 ntBASIC2.68□□□□□ -1.98
HOXD13P35453 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
HOXD13P35453 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HOXD13P35453 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
HOXD13P35453 RNU6-529P-201ENST00000363383 104 ntBASIC2.67□□□□□ -1.98
HOXD13P35453 U8.8-201ENST00000365399 135 ntBASIC2.67□□□□□ -1.98
HOXD13P35453 RNU6-1106P-201ENST00000390845 107 ntBASIC2.67□□□□□ -1.98
HOXD13P35453 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.67□□□□□ -1.98
HOXD13P35453 DLGAP5P1-201ENST00000430307 464 ntBASIC2.67□□□□□ -1.98
HOXD13P35453 MTND3P21-201ENST00000433774 331 ntBASIC2.67□□□□□ -1.98
HOXD13P35453 RPS12P2-201ENST00000439728 269 ntBASIC2.67□□□□□ -1.98
HOXD13P35453 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXD13P35453 AL161788.1-201ENST00000441805 169 ntBASIC2.67□□□□□ -1.98
HOXD13P35453 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXD13P35453 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.67□□□□□ -1.98
HOXD13P35453 AC091885.1-201ENST00000506658 268 ntBASIC2.67□□□□□ -1.98
HOXD13P35453 RPL37P25-201ENST00000507308 276 ntBASIC2.67□□□□□ -1.98
HOXD13P35453 RNU2-53P-201ENST00000516257 147 ntBASIC2.67□□□□□ -1.98
HOXD13P35453 SNORA25.17-201ENST00000517184 124 ntBASIC2.67□□□□□ -1.98
HOXD13P35453 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.67□□□□□ -1.98
HOXD13P35453 AC027807.1-201ENST00000559921 996 ntBASIC2.67□□□□□ -1.98
HOXD13P35453 MIR4658-201ENST00000584344 65 ntBASIC2.67□□□□□ -1.98
HOXD13P35453 RPL30P11-203ENST00000598995 310 ntBASIC2.67□□□□□ -1.98
HOXD13P35453 AL670379.2-201ENST00000604983 252 ntBASIC2.67□□□□□ -1.98
HOXD13P35453 AC002044.1-201ENST00000606707 158 ntBASIC2.67□□□□□ -1.98
HOXD13P35453 AC087241.4-201ENST00000612441 480 ntBASIC2.67□□□□□ -1.98
HOXD13P35453 U4atac.1-201ENST00000618345 95 ntBASIC2.67□□□□□ -1.98
HOXD13P35453 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXD13P35453 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HOXD13P35453 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.66□□□□□ -1.98
HOXD13P35453 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HOXD13P35453 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXD13P35453 RNU6-655P-201ENST00000362858 107 ntBASIC2.66□□□□□ -1.98
HOXD13P35453 SNORA69-201ENST00000383895 132 ntBASIC2.66□□□□□ -1.98
HOXD13P35453 SNORD56-201ENST00000413522 71 ntBASIC2.66□□□□□ -1.98
HOXD13P35453 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXD13P35453 AL121601.2-201ENST00000438019 707 ntBASIC2.66□□□□□ -1.98
HOXD13P35453 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXD13P35453 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXD13P35453 AC009646.1-201ENST00000510455 318 ntBASIC2.66□□□□□ -1.98
HOXD13P35453 Y_RNA.693-201ENST00000516641 110 ntBASIC2.66□□□□□ -1.98
HOXD13P35453 AC022880.1-201ENST00000534017 973 ntBASIC2.66□□□□□ -1.98
HOXD13P35453 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.66□□□□□ -1.98
HOXD13P35453 AC099654.12-201ENST00000639868 649 ntBASIC2.66□□□□□ -1.98
HOXD13P35453 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
HOXD13P35453 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HOXD13P35453 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HOXD13P35453 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HOXD13P35453 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.65□□□□□ -1.98
HOXD13P35453 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.98
HOXD13P35453 RNU6-212P-201ENST00000362642 104 ntBASIC2.65□□□□□ -1.99
HOXD13P35453 RNU6-82P-201ENST00000363970 107 ntBASIC2.65□□□□□ -1.99
HOXD13P35453 XGY1-201ENST00000381172 446 ntBASIC2.65□□□□□ -1.99
HOXD13P35453 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
HOXD13P35453 ARL5AP1-201ENST00000418991 388 ntBASIC2.65□□□□□ -1.99
HOXD13P35453 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HOXD13P35453 AC090515.1-201ENST00000465295 476 ntBASIC2.65□□□□□ -1.99
HOXD13P35453 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXD13P35453 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXD13P35453 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXD13P35453 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.65□□□□□ -1.99
HOXD13P35453 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.65□□□□□ -1.99
HOXD13P35453 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXD13P35453 MIR4424-201ENST00000585257 86 ntBASIC2.65□□□□□ -1.99
HOXD13P35453 AC067747.1-201ENST00000608026 250 ntBASIC2.65□□□□□ -1.99
HOXD13P35453 AC046143.2-201ENST00000609789 160 ntBASIC2.65□□□□□ -1.99
HOXD13P35453 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HOXD13P35453 AC068792.1-201ENST00000621354 417 ntBASIC2.65□□□□□ -1.99
HOXD13P35453 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
HOXD13P35453 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HOXD13P35453 MIR6073-201ENST00000352083 89 ntBASIC2.64□□□□□ -1.99
HOXD13P35453 RNU4-75P-201ENST00000364621 146 ntBASIC2.64□□□□□ -1.99
HOXD13P35453 Y_RNA.318-201ENST00000365131 97 ntBASIC2.64□□□□□ -1.99
HOXD13P35453 DEFA7P-201ENST00000382676 285 ntBASIC2.64□□□□□ -1.99
HOXD13P35453 SNORA41-201ENST00000384675 132 ntBASIC2.64□□□□□ -1.99
HOXD13P35453 RN7SKP158-201ENST00000410453 326 ntBASIC2.64□□□□□ -1.99
HOXD13P35453 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXD13P35453 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXD13P35453 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.64□□□□□ -1.99
HOXD13P35453 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXD13P35453 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.64□□□□□ -1.99
HOXD13P35453 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXD13P35453 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.64□□□□□ -1.99
HOXD13P35453 RPL39P29-201ENST00000447779 157 ntBASIC2.64□□□□□ -1.99
HOXD13P35453 snoU13.14-201ENST00000459372 104 ntBASIC2.64□□□□□ -1.99
HOXD13P35453 DYNLL1P5-201ENST00000467158 270 ntBASIC2.64□□□□□ -1.99
HOXD13P35453 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXD13P35453 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.64□□□□□ -1.99
HOXD13P35453 AC026436.1-201ENST00000510537 270 ntBASIC2.64□□□□□ -1.99
HOXD13P35453 RNU6-506P-201ENST00000516553 94 ntBASIC2.64□□□□□ -1.99
HOXD13P35453 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.64□□□□□ -1.99
HOXD13P35453 COPS8P3-201ENST00000526024 482 ntBASIC2.64□□□□□ -1.99
HOXD13P35453 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.64□□□□□ -1.99
HOXD13P35453 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.64□□□□□ -1.99
HOXD13P35453 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.64□□□□□ -1.99
HOXD13P35453 AL049779.4-201ENST00000604500 156 ntBASIC2.64□□□□□ -1.99
HOXD13P35453 APOOP1-201ENST00000604695 592 ntBASIC2.64□□□□□ -1.99
HOXD13P35453 AC004492.1-201ENST00000607036 742 ntBASIC2.64□□□□□ -1.99
HOXD13P35453 AC009233.1-201ENST00000616477 371 ntBASIC2.64□□□□□ -1.99
HOXD13P35453 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms