Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC018692.3-201ENST00000623929 123 ntBASIC3.71□□□□□ -1.82
CNGA1P29973 AL359757.2-201ENST00000624309 274 ntBASIC3.71□□□□□ -1.82
CNGA1P29973 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CNGA1P29973 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CNGA1P29973 RPL9P7-201ENST00000330965 580 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 RNU4-79P-201ENST00000362764 141 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 RNU6-601P-201ENST00000384540 107 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 RNU6-306P-201ENST00000384617 107 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 MIR517A-201ENST00000385001 87 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.7□□□□□ -1.82
CNGA1P29973 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.7□□□□□ -1.82
CNGA1P29973 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.7□□□□□ -1.82
CNGA1P29973 AC004383.1-201ENST00000438135 289 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 AL513043.1-201ENST00000439124 535 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 DAP3P1-201ENST00000441522 278 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 AC007969.2-201ENST00000441891 191 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.7□□□□□ -1.82
CNGA1P29973 PCMTD1P1-201ENST00000455560 355 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 RPL23AP67-201ENST00000465341 474 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 RPL9P9-202ENST00000466501 579 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 AC107626.1-201ENST00000471084 183 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 RN7SL442P-201ENST00000473804 320 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.7□□□□□ -1.82
CNGA1P29973 Y_RNA.675-201ENST00000516389 149 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 SNORA31.18-201ENST00000517043 134 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.7□□□□□ -1.82
CNGA1P29973 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.7□□□□□ -1.82
CNGA1P29973 AC006023.1-201ENST00000603944 259 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 AC124303.1-201ENST00000605703 360 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.7□□□□□ -1.82
CNGA1P29973 AL359314.1-201ENST00000616913 261 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 AC098657.3-201ENST00000620434 263 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 AC097372.5-201ENST00000623665 376 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.7□□□□□ -1.82
CNGA1P29973 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.7□□□□□ -1.82
CNGA1P29973 AC110774.1-201ENST00000623567 2018 ntBASIC3.7□□□□□ -1.82
CNGA1P29973 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.69□□□□□ -1.82
CNGA1P29973 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CNGA1P29973 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CNGA1P29973 SNORD56.1-201ENST00000362913 68 ntBASIC3.69□□□□□ -1.82
CNGA1P29973 Y_RNA.384-201ENST00000383909 102 ntBASIC3.69□□□□□ -1.82
CNGA1P29973 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CNGA1P29973 RNU6-55P-201ENST00000411092 107 ntBASIC3.69□□□□□ -1.82
CNGA1P29973 RNU6-954P-201ENST00000411355 107 ntBASIC3.69□□□□□ -1.82
CNGA1P29973 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.69□□□□□ -1.82
CNGA1P29973 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.69□□□□□ -1.82
CNGA1P29973 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CNGA1P29973 OSTCP8-201ENST00000445117 448 ntBASIC3.69□□□□□ -1.82
CNGA1P29973 SNORD5.1-201ENST00000458800 75 ntBASIC3.69□□□□□ -1.82
CNGA1P29973 U8.21-201ENST00000459536 136 ntBASIC3.69□□□□□ -1.82
CNGA1P29973 AC092185.1-201ENST00000491371 97 ntBASIC3.69□□□□□ -1.82
CNGA1P29973 RNU6-559P-201ENST00000516151 98 ntBASIC3.69□□□□□ -1.82
CNGA1P29973 RNU5B-3P-201ENST00000516601 115 ntBASIC3.69□□□□□ -1.82
CNGA1P29973 RNU6-91P-201ENST00000607774 107 ntBASIC3.69□□□□□ -1.82
CNGA1P29973 AC019193.3-201ENST00000609144 554 ntBASIC3.69□□□□□ -1.82
CNGA1P29973 AL157817.1-201ENST00000614264 790 ntBASIC3.69□□□□□ -1.82
CNGA1P29973 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.69□□□□□ -1.82
CNGA1P29973 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.69□□□□□ -1.82
CNGA1P29973 RBBP8P1-201ENST00000449447 1844 ntBASIC3.69□□□□□ -1.82
CNGA1P29973 MAPK10-266ENST00000641066 6555 ntBASIC3.69□□□□□ -1.82
CNGA1P29973 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.69□□□□□ -1.82
CNGA1P29973 MTND5P27-201ENST00000428871 1720 ntBASIC3.69□□□□□ -1.82
CNGA1P29973 AP003122.5-201ENST00000527668 3766 ntBASIC3.69□□□□□ -1.82
CNGA1P29973 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.69□□□□□ -1.82
CNGA1P29973 MAPK10-362ENST00000641864 4484 ntBASIC3.69□□□□□ -1.82
CNGA1P29973 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.69□□□□□ -1.82
CNGA1P29973 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CNGA1P29973 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.68□□□□□ -1.82
CNGA1P29973 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CNGA1P29973 RNU1-75P-201ENST00000347264 129 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 Y_RNA.67-201ENST00000362870 100 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 RNU6-622P-201ENST00000384272 103 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 RNU6-1297P-201ENST00000384415 104 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 AC126124.2-201ENST00000413542 321 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 AL358075.3-201ENST00000426289 226 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 AL133396.1-201ENST00000432048 687 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 AC243964.1-201ENST00000441814 261 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.68□□□□□ -1.82
CNGA1P29973 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.68□□□□□ -1.82
CNGA1P29973 Y_RNA.632-201ENST00000459189 102 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 RN7SL429P-201ENST00000479090 223 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 RN7SL489P-201ENST00000486185 223 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 RN7SL327P-201ENST00000488659 223 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 GZMAP1-201ENST00000503054 631 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 AC026782.1-201ENST00000512952 449 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 RNU6-612P-201ENST00000516909 102 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 AC009812.2-201ENST00000517657 457 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 AC107934.2-201ENST00000518653 310 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 CKS1BP7-201ENST00000522230 235 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.68□□□□□ -1.82
CNGA1P29973 FRG2DP-202ENST00000566967 323 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 AC019159.1-201ENST00000605094 187 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 AC018462.2-201ENST00000605375 395 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 RN7SL853P-201ENST00000617250 223 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.68□□□□□ -1.82
CNGA1P29973 UCA1.1-201ENST00000620952 75 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 SNORA50A-202ENST00000629536 136 ntBASIC3.68□□□□□ -1.82
CNGA1P29973 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CNGA1P29973 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CNGA1P29973 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms