Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 Y_RNA.44-201ENST00000362676 108 ntBASIC3.2□□□□□ -1.9
LMO1P25800 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.2□□□□□ -1.9
LMO1P25800 SNORD113-8-201ENST00000363497 74 ntBASIC3.2□□□□□ -1.9
LMO1P25800 Y_RNA.400-201ENST00000383963 111 ntBASIC3.2□□□□□ -1.9
LMO1P25800 RNU6-214P-201ENST00000384130 107 ntBASIC3.2□□□□□ -1.9
LMO1P25800 RNU6-937P-201ENST00000384325 106 ntBASIC3.2□□□□□ -1.9
LMO1P25800 AC092423.1-201ENST00000430165 186 ntBASIC3.2□□□□□ -1.9
LMO1P25800 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.2□□□□□ -1.9
LMO1P25800 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.2□□□□□ -1.9
LMO1P25800 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.2□□□□□ -1.9
LMO1P25800 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.2□□□□□ -1.9
LMO1P25800 snoU13.4-201ENST00000458916 104 ntBASIC3.2□□□□□ -1.9
LMO1P25800 AP001324.2-201ENST00000461163 319 ntBASIC3.2□□□□□ -1.9
LMO1P25800 AC091179.1-201ENST00000461606 579 ntBASIC3.2□□□□□ -1.9
LMO1P25800 RPL9P9-202ENST00000466501 579 ntBASIC3.2□□□□□ -1.9
LMO1P25800 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.2□□□□□ -1.9
LMO1P25800 RNU6-1333P-201ENST00000516162 93 ntBASIC3.2□□□□□ -1.9
LMO1P25800 SNORD116-25-201ENST00000516517 92 ntBASIC3.2□□□□□ -1.9
LMO1P25800 RNU6-352P-201ENST00000516908 107 ntBASIC3.2□□□□□ -1.9
LMO1P25800 AC025755.1-201ENST00000521306 278 ntBASIC3.2□□□□□ -1.9
LMO1P25800 SNRPGP16-201ENST00000533275 226 ntBASIC3.2□□□□□ -1.9
LMO1P25800 AP004242.1-201ENST00000533701 349 ntBASIC3.2□□□□□ -1.9
LMO1P25800 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.2□□□□□ -1.9
LMO1P25800 AC106782.4-201ENST00000568264 210 ntBASIC3.2□□□□□ -1.9
LMO1P25800 MIR3921-201ENST00000577308 85 ntBASIC3.2□□□□□ -1.9
LMO1P25800 MIR4679-2-201ENST00000578358 77 ntBASIC3.2□□□□□ -1.9
LMO1P25800 MIR4738-201ENST00000579134 87 ntBASIC3.2□□□□□ -1.9
LMO1P25800 MIR3613-201ENST00000579844 87 ntBASIC3.2□□□□□ -1.9
LMO1P25800 AC012119.1-201ENST00000603184 222 ntBASIC3.2□□□□□ -1.9
LMO1P25800 AC024220.1-201ENST00000603675 484 ntBASIC3.2□□□□□ -1.9
LMO1P25800 AC098826.3-201ENST00000603823 466 ntBASIC3.2□□□□□ -1.9
LMO1P25800 MIR3976-201ENST00000606807 139 ntBASIC3.2□□□□□ -1.9
LMO1P25800 RNVU1-4-201ENST00000612985 164 ntBASIC3.2□□□□□ -1.9
LMO1P25800 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.2□□□□□ -1.9
LMO1P25800 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.2□□□□□ -1.9
LMO1P25800 MIR6500-201ENST00000622700 86 ntBASIC3.2□□□□□ -1.9
LMO1P25800 AC007785.2-201ENST00000598627 1916 ntBASIC3.2□□□□□ -1.9
LMO1P25800 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.2□□□□□ -1.9
LMO1P25800 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.2□□□□□ -1.9
LMO1P25800 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LMO1P25800 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
LMO1P25800 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LMO1P25800 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.19□□□□□ -1.9
LMO1P25800 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LMO1P25800 SNORA31-201ENST00000362607 130 ntBASIC3.19□□□□□ -1.9
LMO1P25800 Y_RNA.71-201ENST00000362892 104 ntBASIC3.19□□□□□ -1.9
LMO1P25800 Y_RNA.215-201ENST00000364204 112 ntBASIC3.19□□□□□ -1.9
LMO1P25800 RNA5SP267-201ENST00000364893 126 ntBASIC3.19□□□□□ -1.9
LMO1P25800 RNA5SP189-201ENST00000364920 115 ntBASIC3.19□□□□□ -1.9
LMO1P25800 RNU6-701P-201ENST00000384059 107 ntBASIC3.19□□□□□ -1.9
LMO1P25800 U1.1-201ENST00000384101 164 ntBASIC3.19□□□□□ -1.9
LMO1P25800 Y_RNA.504-201ENST00000384481 104 ntBASIC3.19□□□□□ -1.9
LMO1P25800 MIR607-201ENST00000385241 96 ntBASIC3.19□□□□□ -1.9
LMO1P25800 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LMO1P25800 SNORA69.1-201ENST00000390904 137 ntBASIC3.19□□□□□ -1.9
LMO1P25800 AL357075.1-201ENST00000404107 726 ntBASIC3.19□□□□□ -1.9
LMO1P25800 SNORA3.3-201ENST00000408712 125 ntBASIC3.19□□□□□ -1.9
LMO1P25800 RNA5SP494-201ENST00000410653 129 ntBASIC3.19□□□□□ -1.9
LMO1P25800 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.19□□□□□ -1.9
LMO1P25800 AC017083.1-201ENST00000428093 483 ntBASIC3.19□□□□□ -1.9
LMO1P25800 AL159987.2-201ENST00000432754 307 ntBASIC3.19□□□□□ -1.9
LMO1P25800 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.19□□□□□ -1.9
LMO1P25800 SNORA71B-202ENST00000439232 272 ntBASIC3.19□□□□□ -1.9
LMO1P25800 AL513124.1-201ENST00000450410 614 ntBASIC3.19□□□□□ -1.9
LMO1P25800 VN1R105P-201ENST00000486595 910 ntBASIC3.19□□□□□ -1.9
LMO1P25800 TRBV12-2-201ENST00000489763 344 ntBASIC3.19□□□□□ -1.9
LMO1P25800 SNORA31.3-201ENST00000516029 96 ntBASIC3.19□□□□□ -1.9
LMO1P25800 SNORA31.8-201ENST00000516327 108 ntBASIC3.19□□□□□ -1.9
LMO1P25800 RNU6-1234P-201ENST00000516877 103 ntBASIC3.19□□□□□ -1.9
LMO1P25800 RNU6-971P-201ENST00000516920 106 ntBASIC3.19□□□□□ -1.9
LMO1P25800 RANP3-201ENST00000530970 276 ntBASIC3.19□□□□□ -1.9
LMO1P25800 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.19□□□□□ -1.9
LMO1P25800 MIR5696-201ENST00000578474 85 ntBASIC3.19□□□□□ -1.9
LMO1P25800 AL160281.1-201ENST00000605307 311 ntBASIC3.19□□□□□ -1.9
LMO1P25800 BRDTP1-201ENST00000605735 677 ntBASIC3.19□□□□□ -1.9
LMO1P25800 AC112200.1-201ENST00000625015 234 ntBASIC3.19□□□□□ -1.9
LMO1P25800 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.19□□□□□ -1.9
LMO1P25800 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LMO1P25800 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LMO1P25800 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LMO1P25800 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LMO1P25800 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LMO1P25800 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
LMO1P25800 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.18□□□□□ -1.9
LMO1P25800 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LMO1P25800 AC007685.1-201ENST00000329806 452 ntBASIC3.18□□□□□ -1.9
LMO1P25800 RNU5A-1-201ENST00000362698 116 ntBASIC3.18□□□□□ -1.9
LMO1P25800 RNU6-290P-201ENST00000365212 101 ntBASIC3.18□□□□□ -1.9
LMO1P25800 RNA5SP167-201ENST00000365461 116 ntBASIC3.18□□□□□ -1.9
LMO1P25800 Y_RNA.488-201ENST00000384403 102 ntBASIC3.18□□□□□ -1.9
LMO1P25800 MIR184-201ENST00000384962 84 ntBASIC3.18□□□□□ -1.9
LMO1P25800 HSPE1P8-201ENST00000406997 288 ntBASIC3.18□□□□□ -1.9
LMO1P25800 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.18□□□□□ -1.9
LMO1P25800 RNA5SP44-201ENST00000410446 133 ntBASIC3.18□□□□□ -1.9
LMO1P25800 RNU6-325P-201ENST00000411132 105 ntBASIC3.18□□□□□ -1.9
LMO1P25800 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.18□□□□□ -1.9
LMO1P25800 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.18□□□□□ -1.9
LMO1P25800 TMEM167AP1-201ENST00000423409 219 ntBASIC3.18□□□□□ -1.9
LMO1P25800 PTGES3P4-201ENST00000426243 356 ntBASIC3.18□□□□□ -1.9
LMO1P25800 RPS29P7-201ENST00000439662 171 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms