Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 MIR4435-1-201ENST00000582552 80 ntBASIC2.6□□□□□ -1.99
BDNFP23560 BNIP3P16-201ENST00000589779 534 ntBASIC2.6□□□□□ -1.99
BDNFP23560 RSL24D1P11-201ENST00000591045 491 ntBASIC2.6□□□□□ -1.99
BDNFP23560 AL356575.1-201ENST00000603008 283 ntBASIC2.6□□□□□ -1.99
BDNFP23560 AC005609.4-201ENST00000625071 447 ntBASIC2.6□□□□□ -1.99
BDNFP23560 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.6□□□□□ -1.99
BDNFP23560 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
BDNFP23560 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.6□□□□□ -1.99
BDNFP23560 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
BDNFP23560 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
BDNFP23560 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
BDNFP23560 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
BDNFP23560 MIR518A2-201ENST00000384966 87 ntBASIC2.59□□□□□ -1.99
BDNFP23560 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
BDNFP23560 HMGB3P2-201ENST00000411913 584 ntBASIC2.59□□□□□ -1.99
BDNFP23560 MORF4L1P6-201ENST00000418771 268 ntBASIC2.59□□□□□ -1.99
BDNFP23560 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.59□□□□□ -1.99
BDNFP23560 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.59□□□□□ -1.99
BDNFP23560 AL360221.1-201ENST00000445989 335 ntBASIC2.59□□□□□ -1.99
BDNFP23560 RNU6-956P-201ENST00000458868 103 ntBASIC2.59□□□□□ -1.99
BDNFP23560 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.59□□□□□ -1.99
BDNFP23560 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.59□□□□□ -1.99
BDNFP23560 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.59□□□□□ -1.99
BDNFP23560 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.59□□□□□ -1.99
BDNFP23560 AC007375.1-201ENST00000554513 578 ntBASIC2.59□□□□□ -1.99
BDNFP23560 AC233702.2-202ENST00000562547 291 ntBASIC2.59□□□□□ -1.99
BDNFP23560 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.59□□□□□ -1.99
BDNFP23560 AL356157.2-201ENST00000605122 111 ntBASIC2.59□□□□□ -1.99
BDNFP23560 Z69908.1-201ENST00000622603 247 ntBASIC2.59□□□□□ -1.99
BDNFP23560 Z82195.2-201ENST00000612348 18351 ntBASIC2.58□□□□□ -2
BDNFP23560 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.58□□□□□ -2
BDNFP23560 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.58□□□□□ -2
BDNFP23560 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.58□□□□□ -2
BDNFP23560 RNU6-37P-201ENST00000362692 107 ntBASIC2.58□□□□□ -2
BDNFP23560 RNU6-11P-201ENST00000364234 107 ntBASIC2.58□□□□□ -2
BDNFP23560 SNORA16B-201ENST00000364674 135 ntBASIC2.58□□□□□ -2
BDNFP23560 RNU6-25P-201ENST00000383873 107 ntBASIC2.58□□□□□ -2
BDNFP23560 RNU6-1-201ENST00000383898 107 ntBASIC2.58□□□□□ -2
BDNFP23560 RNU5A-6P-201ENST00000384136 116 ntBASIC2.58□□□□□ -2
BDNFP23560 RNU6-48P-201ENST00000384161 107 ntBASIC2.58□□□□□ -2
BDNFP23560 RNU6-36P-201ENST00000384172 107 ntBASIC2.58□□□□□ -2
BDNFP23560 RNU6-4P-201ENST00000384205 107 ntBASIC2.58□□□□□ -2
BDNFP23560 RNU6-5P-201ENST00000384238 107 ntBASIC2.58□□□□□ -2
BDNFP23560 RNU6-301P-201ENST00000384277 107 ntBASIC2.58□□□□□ -2
BDNFP23560 RNU6-3P-201ENST00000384314 107 ntBASIC2.58□□□□□ -2
BDNFP23560 RNU6-16P-201ENST00000384385 107 ntBASIC2.58□□□□□ -2
BDNFP23560 RNU6-15P-201ENST00000384534 107 ntBASIC2.58□□□□□ -2
BDNFP23560 RNU6-2-201ENST00000384627 107 ntBASIC2.58□□□□□ -2
BDNFP23560 RNU6-29P-201ENST00000384637 107 ntBASIC2.58□□□□□ -2
BDNFP23560 RNU6-9-201ENST00000384776 107 ntBASIC2.58□□□□□ -2
BDNFP23560 RNU6-33P-201ENST00000384793 107 ntBASIC2.58□□□□□ -2
BDNFP23560 MIR592-201ENST00000384959 97 ntBASIC2.58□□□□□ -2
BDNFP23560 SNORD70.1-201ENST00000391007 85 ntBASIC2.58□□□□□ -2
BDNFP23560 RNA5SP465-201ENST00000391195 109 ntBASIC2.58□□□□□ -2
BDNFP23560 RNA5SP508-201ENST00000411327 119 ntBASIC2.58□□□□□ -2
BDNFP23560 MTATP6P18-201ENST00000417994 673 ntBASIC2.58□□□□□ -2
BDNFP23560 RPS15AP10-201ENST00000432472 382 ntBASIC2.58□□□□□ -2
BDNFP23560 CR769767.1-201ENST00000436337 346 ntBASIC2.58□□□□□ -2
BDNFP23560 MTND2P4-201ENST00000445034 1004 ntBASIC2.58□□□□□ -2
BDNFP23560 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.58□□□□□ -2
BDNFP23560 RPS27AP8-201ENST00000452665 445 ntBASIC2.58□□□□□ -2
BDNFP23560 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.58□□□□□ -2
BDNFP23560 RN7SL636P-201ENST00000497504 294 ntBASIC2.58□□□□□ -2
BDNFP23560 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.58□□□□□ -2
BDNFP23560 AC010486.1-201ENST00000511793 424 ntBASIC2.58□□□□□ -2
BDNFP23560 AC008413.1-201ENST00000511864 177 ntBASIC2.58□□□□□ -2
BDNFP23560 TBCAP3-201ENST00000512475 312 ntBASIC2.58□□□□□ -2
BDNFP23560 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.58□□□□□ -2
BDNFP23560 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.58□□□□□ -2
BDNFP23560 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.58□□□□□ -2
BDNFP23560 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.58□□□□□ -2
BDNFP23560 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.58□□□□□ -2
BDNFP23560 MIR3136-201ENST00000583498 78 ntBASIC2.58□□□□□ -2
BDNFP23560 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.58□□□□□ -2
BDNFP23560 RNU6-6P-201ENST00000606623 107 ntBASIC2.58□□□□□ -2
BDNFP23560 AP000560.1-201ENST00000624150 1937 ntBASIC2.58□□□□□ -2
BDNFP23560 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.58□□□□□ -2
BDNFP23560 AC069528.2-201ENST00000624849 1991 ntBASIC2.58□□□□□ -2
BDNFP23560 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
BDNFP23560 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.57□□□□□ -2
BDNFP23560 snoU2_19.1-201ENST00000362361 80 ntBASIC2.57□□□□□ -2
BDNFP23560 RNU6-517P-201ENST00000384362 110 ntBASIC2.57□□□□□ -2
BDNFP23560 U3.40-201ENST00000408706 208 ntBASIC2.57□□□□□ -2
BDNFP23560 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.57□□□□□ -2
BDNFP23560 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.57□□□□□ -2
BDNFP23560 USP9YP8-201ENST00000441913 500 ntBASIC2.57□□□□□ -2
BDNFP23560 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.57□□□□□ -2
BDNFP23560 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.57□□□□□ -2
BDNFP23560 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.57□□□□□ -2
BDNFP23560 AL512310.1-201ENST00000548639 172 ntBASIC2.57□□□□□ -2
BDNFP23560 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.57□□□□□ -2
BDNFP23560 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.57□□□□□ -2
BDNFP23560 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.57□□□□□ -2
BDNFP23560 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.57□□□□□ -2
BDNFP23560 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.57□□□□□ -2
BDNFP23560 AC091834.1-201ENST00000614543 472 ntBASIC2.57□□□□□ -2
BDNFP23560 AC091932.3-201ENST00000624223 323 ntBASIC2.57□□□□□ -2
BDNFP23560 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
BDNFP23560 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
BDNFP23560 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms