Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.31□□□□□ -2.2
TPM1P09493 RPL26P26-201ENST00000480251 434 ntBASIC1.31□□□□□ -2.2
TPM1P09493 AC112206.3-201ENST00000514578 389 ntBASIC1.31□□□□□ -2.2
TPM1P09493 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.31□□□□□ -2.2
TPM1P09493 AP003122.4-201ENST00000530980 758 ntBASIC1.31□□□□□ -2.2
TPM1P09493 AP000873.5-201ENST00000533906 236 ntBASIC1.31□□□□□ -2.2
TPM1P09493 MTND4LP25-201ENST00000570218 163 ntBASIC1.31□□□□□ -2.2
TPM1P09493 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.31□□□□□ -2.2
TPM1P09493 MIR8063-201ENST00000621930 81 ntBASIC1.31□□□□□ -2.2
TPM1P09493 AL356596.1-201ENST00000624230 379 ntBASIC1.31□□□□□ -2.2
TPM1P09493 AC099786.3-201ENST00000565735 1410 ntBASIC1.31□□□□□ -2.2
TPM1P09493 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TPM1P09493 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.3□□□□□ -2.2
TPM1P09493 ICE2P2-201ENST00000483823 2787 ntBASIC1.3□□□□□ -2.2
TPM1P09493 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TPM1P09493 RNU6-296P-201ENST00000384608 107 ntBASIC1.3□□□□□ -2.2
TPM1P09493 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.3□□□□□ -2.2
TPM1P09493 AL591704.2-201ENST00000421658 181 ntBASIC1.3□□□□□ -2.2
TPM1P09493 AL590556.1-201ENST00000423231 483 ntBASIC1.3□□□□□ -2.2
TPM1P09493 JTBP1-201ENST00000441314 247 ntBASIC1.3□□□□□ -2.2
TPM1P09493 AL513124.1-201ENST00000450410 614 ntBASIC1.3□□□□□ -2.2
TPM1P09493 RNU1-131P-201ENST00000458943 161 ntBASIC1.3□□□□□ -2.2
TPM1P09493 RPL30P12-201ENST00000474666 353 ntBASIC1.3□□□□□ -2.2
TPM1P09493 RPL30P7-201ENST00000479312 323 ntBASIC1.3□□□□□ -2.2
TPM1P09493 RNU6-276P-201ENST00000516114 96 ntBASIC1.3□□□□□ -2.2
TPM1P09493 Y_RNA.687-201ENST00000516558 91 ntBASIC1.3□□□□□ -2.2
TPM1P09493 SNORA43.2-201ENST00000516652 128 ntBASIC1.3□□□□□ -2.2
TPM1P09493 AP003168.1-201ENST00000530091 307 ntBASIC1.3□□□□□ -2.2
TPM1P09493 AC013828.2-201ENST00000532487 235 ntBASIC1.3□□□□□ -2.2
TPM1P09493 AC092451.2-201ENST00000538746 658 ntBASIC1.3□□□□□ -2.2
TPM1P09493 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.3□□□□□ -2.2
TPM1P09493 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.3□□□□□ -2.2
TPM1P09493 MIR3660-201ENST00000584845 100 ntBASIC1.3□□□□□ -2.2
TPM1P09493 AC025754.2-201ENST00000606491 432 ntBASIC1.3□□□□□ -2.2
TPM1P09493 AC068205.3-201ENST00000636385 468 ntBASIC1.3□□□□□ -2.2
TPM1P09493 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
TPM1P09493 LINC02555-201ENST00000563933 1951 ntBASIC1.29□□□□□ -2.2
TPM1P09493 RNA5SP126-201ENST00000365092 109 ntBASIC1.29□□□□□ -2.2
TPM1P09493 MIR618-201ENST00000385287 98 ntBASIC1.29□□□□□ -2.2
TPM1P09493 BTF3L4P1-201ENST00000413813 468 ntBASIC1.29□□□□□ -2.2
TPM1P09493 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.29□□□□□ -2.2
TPM1P09493 AL589872.1-201ENST00000426602 288 ntBASIC1.29□□□□□ -2.2
TPM1P09493 TOMM22P2-201ENST00000430735 237 ntBASIC1.29□□□□□ -2.2
TPM1P09493 AL008629.1-201ENST00000438615 184 ntBASIC1.29□□□□□ -2.2
TPM1P09493 AC027119.1-201ENST00000440877 241 ntBASIC1.29□□□□□ -2.2
TPM1P09493 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.29□□□□□ -2.2
TPM1P09493 snoU13.15-201ENST00000459407 104 ntBASIC1.29□□□□□ -2.2
TPM1P09493 MTND2P33-201ENST00000506452 1031 ntBASIC1.29□□□□□ -2.2
TPM1P09493 RNU6-548P-201ENST00000517083 115 ntBASIC1.29□□□□□ -2.2
TPM1P09493 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.29□□□□□ -2.2
TPM1P09493 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.29□□□□□ -2.2
TPM1P09493 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.29□□□□□ -2.2
TPM1P09493 AC023050.2-201ENST00000544968 387 ntBASIC1.29□□□□□ -2.2
TPM1P09493 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
TPM1P09493 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
TPM1P09493 RNY4P24-201ENST00000362735 96 ntBASIC1.28□□□□□ -2.2
TPM1P09493 RNU4-91P-201ENST00000364778 135 ntBASIC1.28□□□□□ -2.2
TPM1P09493 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.28□□□□□ -2.2
TPM1P09493 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.28□□□□□ -2.2
TPM1P09493 MTND5P25-201ENST00000430499 799 ntBASIC1.28□□□□□ -2.2
TPM1P09493 USP9YP17-201ENST00000444617 696 ntBASIC1.28□□□□□ -2.2
TPM1P09493 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.28□□□□□ -2.2
TPM1P09493 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.28□□□□□ -2.2
TPM1P09493 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.28□□□□□ -2.2
TPM1P09493 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.28□□□□□ -2.2
TPM1P09493 SNORA19.3-201ENST00000516165 130 ntBASIC1.28□□□□□ -2.2
TPM1P09493 BNIP3P6-201ENST00000549284 499 ntBASIC1.28□□□□□ -2.2
TPM1P09493 MIR5094-201ENST00000578766 85 ntBASIC1.28□□□□□ -2.2
TPM1P09493 AC091135.1-201ENST00000585943 307 ntBASIC1.28□□□□□ -2.2
TPM1P09493 AL136363.2-201ENST00000604173 851 ntBASIC1.28□□□□□ -2.2
TPM1P09493 AC073413.2-201ENST00000604332 360 ntBASIC1.28□□□□□ -2.2
TPM1P09493 AC144521.1-201ENST00000607148 956 ntBASIC1.28□□□□□ -2.2
TPM1P09493 AC013412.1-201ENST00000610687 192 ntBASIC1.28□□□□□ -2.2
TPM1P09493 AL078604.3-201ENST00000615580 211 ntBASIC1.28□□□□□ -2.2
TPM1P09493 U6.42-201ENST00000618440 107 ntBASIC1.28□□□□□ -2.2
TPM1P09493 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.28□□□□□ -2.2
TPM1P09493 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.28□□□□□ -2.2
TPM1P09493 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.28□□□□□ -2.2
TPM1P09493 SNORD56.1-201ENST00000362913 68 ntBASIC1.27□□□□□ -2.21
TPM1P09493 SNORA4.1-201ENST00000364263 144 ntBASIC1.27□□□□□ -2.21
TPM1P09493 SNORA25.8-201ENST00000364831 128 ntBASIC1.27□□□□□ -2.21
TPM1P09493 Y_RNA.332-201ENST00000365271 113 ntBASIC1.27□□□□□ -2.21
TPM1P09493 SNORD116.1-201ENST00000365628 92 ntBASIC1.27□□□□□ -2.21
TPM1P09493 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.27□□□□□ -2.21
TPM1P09493 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.27□□□□□ -2.21
TPM1P09493 RPL23AP30-201ENST00000432419 501 ntBASIC1.27□□□□□ -2.21
TPM1P09493 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.27□□□□□ -2.21
TPM1P09493 AC016550.1-201ENST00000505348 785 ntBASIC1.27□□□□□ -2.21
TPM1P09493 AC079140.2-201ENST00000506193 142 ntBASIC1.27□□□□□ -2.21
TPM1P09493 RNU2-10P-201ENST00000516375 211 ntBASIC1.27□□□□□ -2.21
TPM1P09493 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.27□□□□□ -2.21
TPM1P09493 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.27□□□□□ -2.21
TPM1P09493 RAB11AP2-201ENST00000545905 639 ntBASIC1.27□□□□□ -2.21
TPM1P09493 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.27□□□□□ -2.21
TPM1P09493 DNAJC19P9-201ENST00000555084 351 ntBASIC1.27□□□□□ -2.21
TPM1P09493 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.27□□□□□ -2.21
TPM1P09493 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.27□□□□□ -2.21
TPM1P09493 AL391813.2-201ENST00000609113 322 ntBASIC1.27□□□□□ -2.21
TPM1P09493 AC108747.1-201ENST00000609508 535 ntBASIC1.27□□□□□ -2.21
TPM1P09493 AC120349.3-201ENST00000624377 529 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms