Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RNU6-790P-201ENST00000384479 105 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 RNU6-15P-201ENST00000384534 107 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 RNU6-851P-201ENST00000384565 107 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 RNU6-2-201ENST00000384627 107 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 RNU6-29P-201ENST00000384637 107 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 RNU6-9-201ENST00000384776 107 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 RNU6-33P-201ENST00000384793 107 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 RNU6-823P-201ENST00000391042 103 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DOAP06340 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DOAP06340 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DOAP06340 AC108059.2-201ENST00000434626 151 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 AL731563.1-201ENST00000442202 214 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 AL031274.1-201ENST00000450334 232 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.54□□□□□ -1.84
HLA-DOAP06340 AL160314.1-201ENST00000490836 438 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 AC022447.4-201ENST00000504053 364 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DOAP06340 AC104027.1-201ENST00000521887 300 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 AC084851.1-201ENST00000529105 249 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 RNU6-6P-201ENST00000606623 107 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DOAP06340 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-DOAP06340 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DOAP06340 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
HLA-DOAP06340 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
HLA-DOAP06340 AC066616.2-201ENST00000559334 1481 ntBASIC3.54□□□□□ -1.84
HLA-DOAP06340 Y_RNA.401-201ENST00000383965 117 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 SNORA41-201ENST00000384675 132 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 Y_RNA.574-201ENST00000384766 95 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 MT-TR-201ENST00000387439 65 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 U3.42-201ENST00000408746 214 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 RNU2-23P-201ENST00000410545 195 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DOAP06340 AC093151.1-201ENST00000427711 313 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 AL356867.1-201ENST00000429623 299 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 MYL8P-204ENST00000431574 518 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 AC011816.1-201ENST00000441346 546 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 AL645939.1-201ENST00000453429 797 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 FABP5P15-201ENST00000453566 214 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 RPS20P22-201ENST00000473700 357 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 AC010655.3-201ENST00000478818 450 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 RPL31P13-201ENST00000484151 370 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 AC011005.2-201ENST00000487324 359 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 RN7SL20P-201ENST00000488827 297 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 AC015911.1-201ENST00000495111 156 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 RNU6-264P-201ENST00000517134 104 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 AC004817.2-201ENST00000561794 651 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DOAP06340 AC110741.2-201ENST00000605278 268 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 U4.1-201ENST00000620349 87 ntBASIC3.53□□□□□ -1.84
HLA-DOAP06340 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DOAP06340 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.53□□□□□ -1.85
HLA-DOAP06340 AC005183.1-201ENST00000603687 1979 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DOAP06340 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DOAP06340 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DOAP06340 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DOAP06340 Y_RNA.33-201ENST00000362591 102 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 RNU6-1317P-201ENST00000364582 104 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 RNA5SP189-201ENST00000364920 115 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 Y_RNA.314-201ENST00000365114 102 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 RNU1-115P-201ENST00000365329 160 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 RNU6-1318P-201ENST00000365389 103 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DOAP06340 RNU6-1222P-201ENST00000384615 107 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 MIR301A-201ENST00000385261 86 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 RNU6-174P-201ENST00000410406 106 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 RNA5SP274-201ENST00000410484 108 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 AC245291.1-201ENST00000419501 328 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 RPS15AP6-201ENST00000420703 385 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 AC092573.2-201ENST00000434546 243 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DOAP06340 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DOAP06340 MIR892C-201ENST00000516410 77 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 SNORA64.4-201ENST00000516632 81 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 OR5D17P-201ENST00000531492 978 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DOAP06340 MIR3690-201ENST00000580266 75 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DOAP06340 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.52□□□□□ -1.85
HLA-DOAP06340 AL158827.2-201ENST00000602494 330 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 RMST_4.1-201ENST00000616886 107 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 AL691447.3-201ENST00000635020 330 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DOAP06340 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DOAP06340 AL672296.1-201ENST00000427780 2158 ntBASIC3.52□□□□□ -1.85
HLA-DOAP06340 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DOAP06340 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DOAP06340 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DOAP06340 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DOAP06340 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
HLA-DOAP06340 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
HLA-DOAP06340 Y_RNA.106-201ENST00000363189 100 ntBASIC3.51□□□□□ -1.85
HLA-DOAP06340 Y_RNA.176-201ENST00000363815 109 ntBASIC3.51□□□□□ -1.85
HLA-DOAP06340 SNORA63.7-201ENST00000365579 123 ntBASIC3.51□□□□□ -1.85
HLA-DOAP06340 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HLA-DOAP06340 RNA5SP129-201ENST00000410276 118 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms