Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.08□□□□□ -2.24
HLA-DQB2P05538 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.08□□□□□ -2.24
HLA-DQB2P05538 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.08□□□□□ -2.24
HLA-DQB2P05538 AC068587.4-201ENST00000533893 186 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 AP003034.1-201ENST00000534621 422 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.08□□□□□ -2.24
HLA-DQB2P05538 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.08□□□□□ -2.24
HLA-DQB2P05538 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.08□□□□□ -2.24
HLA-DQB2P05538 AC078795.2-201ENST00000602835 1252 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 AC091965.4-201ENST00000607691 587 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 MIR8074-201ENST00000615081 81 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 AC092140.2-201ENST00000618027 521 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 MIR1248-201ENST00000629190 106 ntBASIC1.08□□□□□ -2.24
HLA-DQB2P05538 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.08□□□□□ -2.24
HLA-DQB2P05538 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
HLA-DQB2P05538 AC092104.1-201ENST00000497346 1441 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 AC099786.3-201ENST00000565735 1410 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 SNORD3E-201ENST00000362899 217 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 Y_RNA.338-201ENST00000365320 114 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 RNY3P13-201ENST00000365542 102 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 RNU6-723P-201ENST00000383973 107 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 RNA5SP390-201ENST00000410191 113 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 RNU6-321P-201ENST00000410912 106 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.07□□□□□ -2.24
HLA-DQB2P05538 CALM1P1-201ENST00000442082 433 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.07□□□□□ -2.24
HLA-DQB2P05538 AL590365.1-201ENST00000450788 243 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 Y_RNA.638-201ENST00000459374 113 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 RPL31P58-201ENST00000469001 379 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 SNORA31.17-201ENST00000516953 127 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 AC091163.3-201ENST00000518269 1144 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.07□□□□□ -2.24
HLA-DQB2P05538 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.07□□□□□ -2.24
HLA-DQB2P05538 AL356057.1-201ENST00000533798 831 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.07□□□□□ -2.24
HLA-DQB2P05538 MIR3169-201ENST00000578032 83 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 MIR3146-201ENST00000580367 79 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 MIR4422-201ENST00000581938 83 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.07□□□□□ -2.24
HLA-DQB2P05538 MIR4295-201ENST00000585286 85 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 AP000860.1-201ENST00000605250 559 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 AC108747.1-201ENST00000609508 535 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 AC091895.1-201ENST00000624494 256 ntBASIC1.07□□□□□ -2.24
HLA-DQB2P05538 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.06□□□□□ -2.24
HLA-DQB2P05538 snoU2_19.1-201ENST00000362361 80 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 RNU6-212P-201ENST00000362642 104 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 Y_RNA.67-201ENST00000362870 100 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 RNU6-23P-201ENST00000363283 107 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 SNORD14B-201ENST00000364533 90 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 RNU6-946P-201ENST00000383878 107 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 RNU6-190P-201ENST00000384154 102 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 RNU1-78P-201ENST00000391248 165 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 PIGPP2-201ENST00000411569 458 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 MTATP6P20-201ENST00000414147 562 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 SNRPEP10-201ENST00000420249 274 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.06□□□□□ -2.24
HLA-DQB2P05538 AL627311.1-201ENST00000431514 115 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 MTCO1P44-201ENST00000441935 243 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 AC244505.5-201ENST00000443639 207 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 AL358794.1-201ENST00000445689 381 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.06□□□□□ -2.24
HLA-DQB2P05538 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.06□□□□□ -2.24
HLA-DQB2P05538 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
HLA-DQB2P05538 Z73417.1-201ENST00000447373 778 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 NDUFB1P2-201ENST00000449477 176 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.06□□□□□ -2.24
HLA-DQB2P05538 AC099513.1-201ENST00000490423 301 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 AC016550.1-201ENST00000505348 785 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.06□□□□□ -2.24
HLA-DQB2P05538 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.06□□□□□ -2.24
HLA-DQB2P05538 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.06□□□□□ -2.24
HLA-DQB2P05538 SUB1P4-201ENST00000566062 339 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.06□□□□□ -2.24
HLA-DQB2P05538 AC098848.2-201ENST00000588023 330 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 MTND3P19-201ENST00000603825 345 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 AL355816.2-201ENST00000610049 647 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 AL159153.1-201ENST00000619688 317 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 AL356596.1-201ENST00000624230 379 ntBASIC1.06□□□□□ -2.24
HLA-DQB2P05538 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
HLA-DQB2P05538 MIR412-201ENST00000362142 91 ntBASIC1.05□□□□□ -2.24
HLA-DQB2P05538 RNA5SP493-201ENST00000364115 91 ntBASIC1.05□□□□□ -2.24
HLA-DQB2P05538 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
HLA-DQB2P05538 SNORD116-20-201ENST00000384529 92 ntBASIC1.05□□□□□ -2.24
HLA-DQB2P05538 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.05□□□□□ -2.24
HLA-DQB2P05538 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.05□□□□□ -2.24
HLA-DQB2P05538 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.05□□□□□ -2.24
HLA-DQB2P05538 GDI2P2-201ENST00000445131 608 ntBASIC1.05□□□□□ -2.24
HLA-DQB2P05538 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.05□□□□□ -2.24
HLA-DQB2P05538 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.05□□□□□ -2.24
HLA-DQB2P05538 COX6CP14-201ENST00000469580 174 ntBASIC1.05□□□□□ -2.24
HLA-DQB2P05538 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
HLA-DQB2P05538 RPL30P1-201ENST00000488676 339 ntBASIC1.05□□□□□ -2.24
HLA-DQB2P05538 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.05□□□□□ -2.24
HLA-DQB2P05538 AC025465.3-201ENST00000510570 311 ntBASIC1.05□□□□□ -2.24
HLA-DQB2P05538 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.05□□□□□ -2.24
HLA-DQB2P05538 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.05□□□□□ -2.24
HLA-DQB2P05538 AC013828.2-201ENST00000532487 235 ntBASIC1.05□□□□□ -2.24
HLA-DQB2P05538 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.05□□□□□ -2.24
HLA-DQB2P05538 RRN3P3-201ENST00000549207 578 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms