Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.62□□□□□ -1.99
COL2A1P02458 snoU13.31-201ENST00000607291 104 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 AC087588.2-201ENST00000617667 426 ntBASIC2.62□□□□□ -1.99
COL2A1P02458 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.62□□□□□ -1.99
COL2A1P02458 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
COL2A1P02458 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
COL2A1P02458 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.61□□□□□ -1.99
COL2A1P02458 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.61□□□□□ -1.99
COL2A1P02458 MIR6073-201ENST00000352083 89 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 RNA5SP258-201ENST00000362750 119 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 Y_RNA.193-201ENST00000363979 102 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 DEFA7P-201ENST00000382676 285 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 SNORA48.3-201ENST00000391081 134 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 AL359634.1-202ENST00000404721 284 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 RNU2-47P-201ENST00000410649 186 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 RNU6-321P-201ENST00000410912 106 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.61□□□□□ -1.99
COL2A1P02458 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.61□□□□□ -1.99
COL2A1P02458 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.61□□□□□ -1.99
COL2A1P02458 SNRPFP3-201ENST00000457792 225 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 RNU7-180P-201ENST00000459240 63 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 RNU7-66P-201ENST00000459469 62 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 RPL23AP62-201ENST00000463396 453 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 MTCO2P29-201ENST00000465212 189 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 HMGB1P30-201ENST00000492455 606 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.61□□□□□ -1.99
COL2A1P02458 RBBP4P6-201ENST00000508098 202 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 RNA5SP503-201ENST00000517047 117 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 RNU6-988P-201ENST00000519081 107 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.61□□□□□ -1.99
COL2A1P02458 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COL2A1P02458 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.61□□□□□ -1.99
COL2A1P02458 AC090615.1-201ENST00000577519 154 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
COL2A1P02458 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.61□□□□□ -1.99
COL2A1P02458 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.61□□□□□ -1.99
COL2A1P02458 MIR6845-201ENST00000613182 61 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 uc_338.12-201ENST00000616344 181 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 uc_338.34-201ENST00000617467 174 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.61□□□□□ -1.99
COL2A1P02458 U6.114-201ENST00000636407 96 ntBASIC2.61□□□□□ -1.99
COL2A1P02458 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL2A1P02458 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL2A1P02458 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COL2A1P02458 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL2A1P02458 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.61□□□□□ -1.99
COL2A1P02458 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
COL2A1P02458 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
COL2A1P02458 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
COL2A1P02458 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
COL2A1P02458 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
COL2A1P02458 Y_RNA.80-201ENST00000362996 102 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 Y_RNA.148-201ENST00000363557 117 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 Y_RNA.167-201ENST00000363735 109 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 RNU6-1188P-201ENST00000363795 107 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 RNU6-1243P-201ENST00000364028 107 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 Y_RNA.485-201ENST00000384395 102 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 Y_RNA.557-201ENST00000384680 107 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 Y_RNA.576-201ENST00000384781 102 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 SNORA26.9-201ENST00000391322 122 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
COL2A1P02458 Y_RNA.646-201ENST00000410980 101 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 AC009965.2-201ENST00000425328 970 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.6□□□□□ -1.99
COL2A1P02458 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.6□□□□□ -1.99
COL2A1P02458 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.6□□□□□ -1.99
COL2A1P02458 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 AL137792.2-201ENST00000443484 235 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 AL353691.1-201ENST00000451332 387 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 RPL12P25-201ENST00000455592 494 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 Y_RNA.653-201ENST00000459091 95 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.6□□□□□ -1.99
COL2A1P02458 RPL21P93-201ENST00000480465 489 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 RPL30P11-201ENST00000495304 339 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.6□□□□□ -1.99
COL2A1P02458 AC104806.1-201ENST00000508720 308 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 SNORD27.1-201ENST00000516319 72 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 RN7SKP295-201ENST00000517264 153 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.6□□□□□ -1.99
COL2A1P02458 AC007536.1-201ENST00000533382 349 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.6□□□□□ -1.99
COL2A1P02458 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.6□□□□□ -1.99
COL2A1P02458 AC105224.1-201ENST00000587055 421 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 NF1P5-201ENST00000588287 448 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.6□□□□□ -1.99
COL2A1P02458 XIAPP1-201ENST00000603162 600 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 7SK.7-201ENST00000603504 247 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 AC092747.3-201ENST00000603769 301 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 AC099778.2-201ENST00000610904 211 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 AC012409.4-201ENST00000612923 249 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 AL390240.1-201ENST00000612950 384 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.6□□□□□ -1.99
COL2A1P02458 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 MIR6132-201ENST00000622083 109 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 AC007792.1-201ENST00000623023 402 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 MIR219B-201ENST00000637023 88 ntBASIC2.6□□□□□ -1.99
COL2A1P02458 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.6□□□□□ -1.99
COL2A1P02458 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.6□□□□□ -1.99
COL2A1P02458 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms