Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 CST2P1-201ENST00000425770 87 ntBASIC0.82□□□□□ -2.28
COL1A1P02452 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.82□□□□□ -2.28
COL1A1P02452 COX7BP2-201ENST00000437976 242 ntBASIC0.82□□□□□ -2.28
COL1A1P02452 MTND5P14-201ENST00000441481 1267 ntBASIC0.82□□□□□ -2.28
COL1A1P02452 AC104563.1-201ENST00000476147 376 ntBASIC0.82□□□□□ -2.28
COL1A1P02452 AC109927.2-201ENST00000506416 303 ntBASIC0.82□□□□□ -2.28
COL1A1P02452 AC116655.1-201ENST00000508324 901 ntBASIC0.82□□□□□ -2.28
COL1A1P02452 AC093809.1-201ENST00000509155 340 ntBASIC0.82□□□□□ -2.28
COL1A1P02452 RNU6-1225P-201ENST00000516336 65 ntBASIC0.82□□□□□ -2.28
COL1A1P02452 AC002400.1-201ENST00000569310 726 ntBASIC0.82□□□□□ -2.28
COL1A1P02452 AC008759.3-201ENST00000613300 508 ntBASIC0.82□□□□□ -2.28
COL1A1P02452 AC138627.2-201ENST00000624202 601 ntBASIC0.82□□□□□ -2.28
COL1A1P02452 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.82□□□□□ -2.28
COL1A1P02452 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
COL1A1P02452 RNA5SP347-201ENST00000362445 119 ntBASIC0.81□□□□□ -2.28
COL1A1P02452 RNU6-468P-201ENST00000384003 109 ntBASIC0.81□□□□□ -2.28
COL1A1P02452 RNU6-611P-201ENST00000384276 104 ntBASIC0.81□□□□□ -2.28
COL1A1P02452 MIR1262-201ENST00000408276 93 ntBASIC0.81□□□□□ -2.28
COL1A1P02452 RPL21P24-201ENST00000413752 448 ntBASIC0.81□□□□□ -2.28
COL1A1P02452 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.81□□□□□ -2.28
COL1A1P02452 NCOR1P3-201ENST00000420479 303 ntBASIC0.81□□□□□ -2.28
COL1A1P02452 ISCA1P1-201ENST00000426679 387 ntBASIC0.81□□□□□ -2.28
COL1A1P02452 RPL36AP53-201ENST00000432891 316 ntBASIC0.81□□□□□ -2.28
COL1A1P02452 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.81□□□□□ -2.28
COL1A1P02452 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.81□□□□□ -2.28
COL1A1P02452 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.81□□□□□ -2.28
COL1A1P02452 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.81□□□□□ -2.28
COL1A1P02452 AC025465.3-201ENST00000510570 311 ntBASIC0.81□□□□□ -2.28
COL1A1P02452 RNU6-678P-201ENST00000516832 109 ntBASIC0.81□□□□□ -2.28
COL1A1P02452 RN7SKP258-201ENST00000517151 304 ntBASIC0.81□□□□□ -2.28
COL1A1P02452 RNU6-586P-201ENST00000517265 104 ntBASIC0.81□□□□□ -2.28
COL1A1P02452 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.81□□□□□ -2.28
COL1A1P02452 AP003122.4-201ENST00000530980 758 ntBASIC0.81□□□□□ -2.28
COL1A1P02452 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.81□□□□□ -2.28
COL1A1P02452 AC019288.1-201ENST00000557918 224 ntBASIC0.81□□□□□ -2.28
COL1A1P02452 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.81□□□□□ -2.28
COL1A1P02452 VN1R87P-201ENST00000596706 487 ntBASIC0.81□□□□□ -2.28
COL1A1P02452 AL161798.1-201ENST00000604630 131 ntBASIC0.81□□□□□ -2.28
COL1A1P02452 AP003485.1-201ENST00000625093 753 ntBASIC0.81□□□□□ -2.28
COL1A1P02452 CBX3P1-201ENST00000325243 554 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 RNU6-343P-201ENST00000364709 104 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.8□□□□□ -2.28
COL1A1P02452 MIR597-201ENST00000384968 97 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 MTCO1P56-201ENST00000401674 224 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 AL139397.2-201ENST00000404529 772 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 RNA5SP100-201ENST00000410903 110 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 RNA5SP59-201ENST00000410922 110 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 TIMM9P2-201ENST00000419324 266 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.8□□□□□ -2.28
COL1A1P02452 TOMM22P2-201ENST00000430735 237 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 AC010153.1-201ENST00000432862 727 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 AL135790.2-201ENST00000437701 267 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 AL096829.2-201ENST00000446582 742 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 MTND1P31-201ENST00000449206 961 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 OR6C5P-201ENST00000452388 923 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
COL1A1P02452 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.8□□□□□ -2.28
COL1A1P02452 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 RNU6-334P-201ENST00000517072 102 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.8□□□□□ -2.28
COL1A1P02452 HSPE1P19-201ENST00000603327 295 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 AL356094.1-201ENST00000624663 1212 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 U6.99-201ENST00000637524 83 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 RNU6-512P-201ENST00000364438 103 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
COL1A1P02452 RNU2-48P-201ENST00000410694 191 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.8□□□□□ -2.28
COL1A1P02452 UBE2D3P3-201ENST00000426992 425 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.8□□□□□ -2.28
COL1A1P02452 MTND4P15-201ENST00000437913 1033 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 BRK1P2-201ENST00000442875 223 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 ELOCP30-201ENST00000447108 299 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 AC092001.1-201ENST00000453012 261 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 FABP5P15-201ENST00000453566 214 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.8□□□□□ -2.28
COL1A1P02452 PRELID3BP1-201ENST00000457142 540 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.8□□□□□ -2.28
COL1A1P02452 MEMO1P3-201ENST00000459811 302 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 AC011005.2-201ENST00000487324 359 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.8□□□□□ -2.28
COL1A1P02452 PTP4A1P4-201ENST00000512479 322 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 RNU6-496P-201ENST00000516145 99 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 RNU6-143P-201ENST00000516942 93 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.8□□□□□ -2.28
COL1A1P02452 DEFB130C-202ENST00000530001 230 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.8□□□□□ -2.28
COL1A1P02452 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.8□□□□□ -2.28
COL1A1P02452 AC069545.1-201ENST00000605671 358 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.8□□□□□ -2.28
COL1A1P02452 AC087588.2-201ENST00000617667 426 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.8□□□□□ -2.28
COL1A1P02452 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 AP000676.3-201ENST00000623299 569 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.8□□□□□ -2.28
COL1A1P02452 OR4G3P-201ENST00000633500 913 ntBASIC0.8□□□□□ -2.28
COL1A1P02452 AC092125.1-201ENST00000562568 1995 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms