Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC132479.1-201ENST00000449160 144 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 C1DP4-201ENST00000455429 424 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.52□□□□□ -2.17
HLA-DQA1P01909 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.52□□□□□ -2.17
HLA-DQA1P01909 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.52□□□□□ -2.17
HLA-DQA1P01909 MTCYBP40-201ENST00000509390 1135 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.52□□□□□ -2.17
HLA-DQA1P01909 SCARNA16.3-201ENST00000516595 184 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 Y_RNA.695-201ENST00000516715 107 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 RNA5SP503-201ENST00000517047 117 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 SNORA31.25-201ENST00000517242 134 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.52□□□□□ -2.17
HLA-DQA1P01909 AC025449.1-201ENST00000603896 529 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 AL158063.1-201ENST00000615349 536 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 AC009161.2-201ENST00000624626 138 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 AC009487.4-201ENST00000624969 3585 ntBASIC1.52□□□□□ -2.17
HLA-DQA1P01909 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.52□□□□□ -2.17
HLA-DQA1P01909 AL390237.1-201ENST00000404226 1415 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 Y_RNA.324-201ENST00000365165 102 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 SNORA75-201ENST00000384158 137 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 RAP1BP3-201ENST00000407180 549 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 RNA5SP390-201ENST00000410191 113 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 RNU2-23P-201ENST00000410545 195 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 RNA5SP508-201ENST00000411327 119 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 RNA5SP270-201ENST00000411361 118 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HLA-DQA1P01909 HMGN2P19-201ENST00000425149 265 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.51□□□□□ -2.17
HLA-DQA1P01909 AL365400.1-201ENST00000431854 640 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.51□□□□□ -2.17
HLA-DQA1P01909 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.51□□□□□ -2.17
HLA-DQA1P01909 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.51□□□□□ -2.17
HLA-DQA1P01909 UBE2DNL-203ENST00000474922 222 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 AL121594.1-201ENST00000475906 575 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.51□□□□□ -2.17
HLA-DQA1P01909 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.51□□□□□ -2.17
HLA-DQA1P01909 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.51□□□□□ -2.17
HLA-DQA1P01909 RNU2-44P-201ENST00000516795 194 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 SNORA48.11-201ENST00000517015 89 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 RNU6-430P-201ENST00000517078 107 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 RNU6-586P-201ENST00000517265 104 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 AC107953.1-201ENST00000522216 297 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.51□□□□□ -2.17
HLA-DQA1P01909 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.51□□□□□ -2.17
HLA-DQA1P01909 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.51□□□□□ -2.17
HLA-DQA1P01909 MIR3126-201ENST00000577443 74 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 AC024614.2-201ENST00000577584 372 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 MIR4703-201ENST00000577728 79 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.51□□□□□ -2.17
HLA-DQA1P01909 MIR4672-201ENST00000583126 81 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 AC087752.4-201ENST00000605911 462 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 AC008945.2-201ENST00000606056 604 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 AC022079.1-201ENST00000621546 602 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 Z69908.1-201ENST00000622603 247 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 AC097372.5-201ENST00000623665 376 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 AC243829.7-201ENST00000633081 225 ntBASIC1.51□□□□□ -2.17
HLA-DQA1P01909 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.51□□□□□ -2.17
HLA-DQA1P01909 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.51□□□□□ -2.17
HLA-DQA1P01909 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
HLA-DQA1P01909 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
HLA-DQA1P01909 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
HLA-DQA1P01909 RNU6-37P-201ENST00000362692 107 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 RNU6-11P-201ENST00000364234 107 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 RNU5E-7P-201ENST00000365290 117 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 RNU6-25P-201ENST00000383873 107 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 RNU6-1-201ENST00000383898 107 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 RNU6-48P-201ENST00000384161 107 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 RNU6-36P-201ENST00000384172 107 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 RNU6-4P-201ENST00000384205 107 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 RNU6-5P-201ENST00000384238 107 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 RNU6-3P-201ENST00000384314 107 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 RNU6-16P-201ENST00000384385 107 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 RNU6-15P-201ENST00000384534 107 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 RNU6-2-201ENST00000384627 107 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 RNU6-29P-201ENST00000384637 107 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 RNU6-9-201ENST00000384776 107 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 RNU6-33P-201ENST00000384793 107 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 RNU4-53P-201ENST00000410828 140 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 BTF3L4P1-201ENST00000413813 468 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DQA1P01909 AC009963.1-201ENST00000417265 157 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 TOMM20P4-201ENST00000427861 435 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DQA1P01909 CETN4P-201ENST00000432407 469 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 MTND1P18-201ENST00000448191 573 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 AL353752.1-201ENST00000454946 260 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 RNA5SP233-201ENST00000459153 113 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.5□□□□□ -2.17
HLA-DQA1P01909 ARL2BPP4-201ENST00000506854 471 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 MTCO3P7-201ENST00000510008 774 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 AC010486.1-201ENST00000511793 424 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.5□□□□□ -2.17
HLA-DQA1P01909 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DQA1P01909 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DQA1P01909 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.5□□□□□ -2.17
HLA-DQA1P01909 IMMP1LP2-201ENST00000552954 492 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 SUB1P2-201ENST00000556401 297 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DQA1P01909 AL096840.1-201ENST00000603287 93 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 ELOCP5-201ENST00000604924 333 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms