Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 Y_RNA.618-201ENST00000410949 107 ntBASIC3.25□□□□□ -1.89
TOP3BO95985 NUP35P1-201ENST00000422734 947 ntBASIC3.25□□□□□ -1.89
TOP3BO95985 USMG5P1-201ENST00000425964 177 ntBASIC3.25□□□□□ -1.89
TOP3BO95985 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.25□□□□□ -1.89
TOP3BO95985 CBX3P6-201ENST00000430257 527 ntBASIC3.25□□□□□ -1.89
TOP3BO95985 USP9YP30-201ENST00000430729 455 ntBASIC3.25□□□□□ -1.89
TOP3BO95985 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.25□□□□□ -1.89
TOP3BO95985 AC009901.1-201ENST00000506703 541 ntBASIC3.25□□□□□ -1.89
TOP3BO95985 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.25□□□□□ -1.89
TOP3BO95985 FCF1P8-201ENST00000510322 597 ntBASIC3.25□□□□□ -1.89
TOP3BO95985 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.25□□□□□ -1.89
TOP3BO95985 APOOP4-201ENST00000513530 597 ntBASIC3.25□□□□□ -1.89
TOP3BO95985 RNA5SP356-201ENST00000515972 94 ntBASIC3.25□□□□□ -1.89
TOP3BO95985 RNU6-120P-201ENST00000516077 103 ntBASIC3.25□□□□□ -1.89
TOP3BO95985 SCARNA16.2-201ENST00000516520 172 ntBASIC3.25□□□□□ -1.89
TOP3BO95985 RNA5SP384-201ENST00000516615 116 ntBASIC3.25□□□□□ -1.89
TOP3BO95985 AP002404.1-201ENST00000532005 451 ntBASIC3.25□□□□□ -1.89
TOP3BO95985 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.25□□□□□ -1.89
TOP3BO95985 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.25□□□□□ -1.89
TOP3BO95985 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.25□□□□□ -1.89
TOP3BO95985 AC002044.1-201ENST00000606707 158 ntBASIC3.25□□□□□ -1.89
TOP3BO95985 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TOP3BO95985 uc_338.1-201ENST00000612113 180 ntBASIC3.25□□□□□ -1.89
TOP3BO95985 SNORD39.4-201ENST00000620099 78 ntBASIC3.25□□□□□ -1.89
TOP3BO95985 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.25□□□□□ -1.89
TOP3BO95985 AC118273.1-201ENST00000525324 3006 ntBASIC3.25□□□□□ -1.89
TOP3BO95985 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TOP3BO95985 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TOP3BO95985 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TOP3BO95985 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TOP3BO95985 AC138393.1-203ENST00000327086 343 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 RNU6-1167P-201ENST00000363227 94 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 Y_RNA.153-201ENST00000363615 91 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 RNU6-266P-201ENST00000364225 107 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 RNU6-512P-201ENST00000364438 103 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 RNU6-1303P-201ENST00000364841 107 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 RNU1-115P-201ENST00000365329 160 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 RNU6-26P-201ENST00000383985 107 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 Y_RNA.428-201ENST00000384078 102 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 Y_RNA.645-201ENST00000391229 102 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 RNU6-293P-201ENST00000411259 106 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 AC243428.1-201ENST00000421099 264 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 AC093151.1-201ENST00000427711 313 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.24□□□□□ -1.89
TOP3BO95985 RPS23P3-201ENST00000470993 430 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 RPS20P22-201ENST00000473700 357 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 AC110794.1-201ENST00000505816 425 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 AC022493.2-201ENST00000506122 481 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 AC116655.1-201ENST00000508324 901 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 AC092436.3-201ENST00000511788 257 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 RNA5SP471-201ENST00000516971 106 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 SNORD116.3-201ENST00000517176 78 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 RNA5SP380-201ENST00000517190 98 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 ATP5F1P5-201ENST00000526403 760 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.24□□□□□ -1.89
TOP3BO95985 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.24□□□□□ -1.89
TOP3BO95985 AC113195.1-201ENST00000579952 141 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.24□□□□□ -1.89
TOP3BO95985 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.24□□□□□ -1.89
TOP3BO95985 MIR15A-201ENST00000607334 83 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 AC007792.1-201ENST00000623023 402 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 AC018692.3-201ENST00000623929 123 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 AC073476.4-201ENST00000628409 72 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TOP3BO95985 AC002546.1-201ENST00000588041 2504 ntBASIC3.24□□□□□ -1.89
TOP3BO95985 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TOP3BO95985 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
TOP3BO95985 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TOP3BO95985 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.24□□□□□ -1.89
TOP3BO95985 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TOP3BO95985 AC005592.1-201ENST00000566527 1640 ntBASIC3.23□□□□□ -1.89
TOP3BO95985 CDC27P3-201ENST00000635418 1910 ntBASIC3.23□□□□□ -1.89
TOP3BO95985 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
TOP3BO95985 Y_RNA.2-201ENST00000362330 96 ntBASIC3.23□□□□□ -1.89
TOP3BO95985 RNU6-1059P-201ENST00000363752 98 ntBASIC3.23□□□□□ -1.89
TOP3BO95985 SET-203ENST00000372688 801 ntTSL 2 BASIC3.23□□□□□ -1.89
TOP3BO95985 Y_RNA.574-201ENST00000384766 95 ntBASIC3.23□□□□□ -1.89
TOP3BO95985 MIR493-201ENST00000385254 89 ntBASIC3.23□□□□□ -1.89
TOP3BO95985 RNU4-47P-201ENST00000410876 114 ntBASIC3.23□□□□□ -1.89
TOP3BO95985 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.23□□□□□ -1.89
TOP3BO95985 Z85995.1-201ENST00000415547 335 ntBASIC3.23□□□□□ -1.89
TOP3BO95985 AC007919.1-201ENST00000429380 217 ntBASIC3.23□□□□□ -1.89
TOP3BO95985 AC009237.8-201ENST00000445492 379 ntBASIC3.23□□□□□ -1.89
TOP3BO95985 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.23□□□□□ -1.89
TOP3BO95985 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.23□□□□□ -1.89
TOP3BO95985 RNU6-635P-201ENST00000516651 102 ntBASIC3.23□□□□□ -1.89
TOP3BO95985 RNU6-914P-201ENST00000516749 109 ntBASIC3.23□□□□□ -1.89
TOP3BO95985 RNU6-143P-201ENST00000516942 93 ntBASIC3.23□□□□□ -1.89
TOP3BO95985 GNAI2P1-201ENST00000541815 315 ntBASIC3.23□□□□□ -1.89
TOP3BO95985 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.23□□□□□ -1.89
TOP3BO95985 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.23□□□□□ -1.89
TOP3BO95985 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
TOP3BO95985 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TOP3BO95985 AC006557.5-201ENST00000603126 811 ntBASIC3.23□□□□□ -1.89
TOP3BO95985 AC098826.3-201ENST00000603823 466 ntBASIC3.23□□□□□ -1.89
TOP3BO95985 AC104695.3-201ENST00000604052 296 ntBASIC3.23□□□□□ -1.89
TOP3BO95985 PRR13P7-201ENST00000605538 430 ntBASIC3.23□□□□□ -1.89
TOP3BO95985 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms