Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.35□□□□□ -2.19
VAPBO95292 RPL30P12-201ENST00000474666 353 ntBASIC1.35□□□□□ -2.19
VAPBO95292 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.35□□□□□ -2.19
VAPBO95292 AC132942.1-201ENST00000486753 483 ntBASIC1.35□□□□□ -2.19
VAPBO95292 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.35□□□□□ -2.19
VAPBO95292 AC025465.3-201ENST00000510570 311 ntBASIC1.35□□□□□ -2.19
VAPBO95292 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.35□□□□□ -2.19
VAPBO95292 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.35□□□□□ -2.19
VAPBO95292 MIR4298-201ENST00000584380 73 ntBASIC1.35□□□□□ -2.19
VAPBO95292 AC009977.1-201ENST00000586015 570 ntBASIC1.35□□□□□ -2.19
VAPBO95292 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.35□□□□□ -2.19
VAPBO95292 AP000654.2-201ENST00000605633 586 ntBASIC1.35□□□□□ -2.19
VAPBO95292 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.34□□□□□ -2.19
VAPBO95292 ZNF209P-201ENST00000593450 2304 ntBASIC1.34□□□□□ -2.19
VAPBO95292 AC073343.1-201ENST00000328239 651 ntBASIC1.34□□□□□ -2.19
VAPBO95292 SNORD56.1-201ENST00000362913 68 ntBASIC1.34□□□□□ -2.19
VAPBO95292 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
VAPBO95292 RNU6-1179P-201ENST00000384667 107 ntBASIC1.34□□□□□ -2.19
VAPBO95292 MIR758-201ENST00000390227 88 ntBASIC1.34□□□□□ -2.19
VAPBO95292 RNA5SP100-201ENST00000410903 110 ntBASIC1.34□□□□□ -2.19
VAPBO95292 RNA5SP59-201ENST00000410922 110 ntBASIC1.34□□□□□ -2.19
VAPBO95292 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.34□□□□□ -2.19
VAPBO95292 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.34□□□□□ -2.19
VAPBO95292 MTCYBP5-201ENST00000423752 1135 ntBASIC1.34□□□□□ -2.19
VAPBO95292 HMGB1P31-201ENST00000437242 427 ntBASIC1.34□□□□□ -2.19
VAPBO95292 snoU13.9-201ENST00000458927 103 ntBASIC1.34□□□□□ -2.19
VAPBO95292 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.34□□□□□ -2.19
VAPBO95292 AC116347.2-201ENST00000514912 523 ntBASIC1.34□□□□□ -2.19
VAPBO95292 RNVU1-2-201ENST00000516326 135 ntBASIC1.34□□□□□ -2.19
VAPBO95292 SNORA43.2-201ENST00000516652 128 ntBASIC1.34□□□□□ -2.19
VAPBO95292 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.34□□□□□ -2.19
VAPBO95292 AP003033.1-201ENST00000527244 415 ntBASIC1.34□□□□□ -2.19
VAPBO95292 AP003122.4-201ENST00000530980 758 ntBASIC1.34□□□□□ -2.19
VAPBO95292 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.34□□□□□ -2.19
VAPBO95292 MIR4422-201ENST00000581938 83 ntBASIC1.34□□□□□ -2.19
VAPBO95292 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.34□□□□□ -2.19
VAPBO95292 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.34□□□□□ -2.19
VAPBO95292 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.34□□□□□ -2.19
VAPBO95292 AC063943.3-201ENST00000615562 356 ntBASIC1.34□□□□□ -2.19
VAPBO95292 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.34□□□□□ -2.19
VAPBO95292 WWP1P1-201ENST00000466609 2769 ntBASIC1.34□□□□□ -2.2
VAPBO95292 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.34□□□□□ -2.2
VAPBO95292 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
VAPBO95292 RNU6-439P-201ENST00000384188 106 ntBASIC1.33□□□□□ -2.2
VAPBO95292 U8.10-201ENST00000384260 133 ntBASIC1.33□□□□□ -2.2
VAPBO95292 SNORA17.3-201ENST00000391159 129 ntBASIC1.33□□□□□ -2.2
VAPBO95292 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.33□□□□□ -2.2
VAPBO95292 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.33□□□□□ -2.2
VAPBO95292 MTND1P12-201ENST00000455231 147 ntBASIC1.33□□□□□ -2.2
VAPBO95292 snoU109.3-201ENST00000459477 145 ntBASIC1.33□□□□□ -2.2
VAPBO95292 RPL30P1-201ENST00000488676 339 ntBASIC1.33□□□□□ -2.2
VAPBO95292 MTCYBP18-201ENST00000501056 747 ntBASIC1.33□□□□□ -2.2
VAPBO95292 TPT1P8-201ENST00000510120 555 ntBASIC1.33□□□□□ -2.2
VAPBO95292 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.33□□□□□ -2.2
VAPBO95292 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.33□□□□□ -2.2
VAPBO95292 RNU1-92P-201ENST00000517017 135 ntBASIC1.33□□□□□ -2.2
VAPBO95292 AC022616.6-201ENST00000520479 119 ntBASIC1.33□□□□□ -2.2
VAPBO95292 AC107934.1-201ENST00000522215 217 ntBASIC1.33□□□□□ -2.2
VAPBO95292 TRAV32-201ENST00000553993 340 ntBASIC1.33□□□□□ -2.2
VAPBO95292 AL161670.1-201ENST00000554348 137 ntBASIC1.33□□□□□ -2.2
VAPBO95292 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.33□□□□□ -2.2
VAPBO95292 DNAJC19P9-201ENST00000555084 351 ntBASIC1.33□□□□□ -2.2
VAPBO95292 AC068338.1-201ENST00000565567 176 ntBASIC1.33□□□□□ -2.2
VAPBO95292 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.33□□□□□ -2.2
VAPBO95292 BNIP3P40-201ENST00000596017 556 ntBASIC1.33□□□□□ -2.2
VAPBO95292 DEFB131E-202ENST00000602581 683 ntBASIC1.33□□□□□ -2.2
VAPBO95292 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.33□□□□□ -2.2
VAPBO95292 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.33□□□□□ -2.2
VAPBO95292 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
VAPBO95292 AC245060.5-201ENST00000610778 3293 ntBASIC1.33□□□□□ -2.2
VAPBO95292 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
VAPBO95292 RNA5SP493-201ENST00000364115 91 ntBASIC1.32□□□□□ -2.2
VAPBO95292 RAP1BP3-201ENST00000407180 549 ntBASIC1.32□□□□□ -2.2
VAPBO95292 AL357139.1-201ENST00000407792 426 ntBASIC1.32□□□□□ -2.2
VAPBO95292 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.32□□□□□ -2.2
VAPBO95292 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.32□□□□□ -2.2
VAPBO95292 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.32□□□□□ -2.2
VAPBO95292 EXOSC3P1-201ENST00000448649 500 ntBASIC1.32□□□□□ -2.2
VAPBO95292 AL590365.1-201ENST00000450788 243 ntBASIC1.32□□□□□ -2.2
VAPBO95292 RNU1-123P-201ENST00000458950 160 ntBASIC1.32□□□□□ -2.2
VAPBO95292 AC114801.2-201ENST00000503825 781 ntBASIC1.32□□□□□ -2.2
VAPBO95292 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.32□□□□□ -2.2
VAPBO95292 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.32□□□□□ -2.2
VAPBO95292 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.32□□□□□ -2.2
VAPBO95292 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.32□□□□□ -2.2
VAPBO95292 AC002400.1-201ENST00000569310 726 ntBASIC1.32□□□□□ -2.2
VAPBO95292 AC022022.2-201ENST00000602989 360 ntBASIC1.32□□□□□ -2.2
VAPBO95292 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.32□□□□□ -2.2
VAPBO95292 AC026585.1-201ENST00000619582 524 ntBASIC1.32□□□□□ -2.2
VAPBO95292 MIR1248-201ENST00000629190 106 ntBASIC1.32□□□□□ -2.2
VAPBO95292 RNU6-931P-201ENST00000363850 107 ntBASIC1.31□□□□□ -2.2
VAPBO95292 Y_RNA.302-201ENST00000364997 102 ntBASIC1.31□□□□□ -2.2
VAPBO95292 BTF3L4P1-201ENST00000413813 468 ntBASIC1.31□□□□□ -2.2
VAPBO95292 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.31□□□□□ -2.2
VAPBO95292 AC092648.1-201ENST00000425870 423 ntBASIC1.31□□□□□ -2.2
VAPBO95292 USP9YP17-201ENST00000444617 696 ntBASIC1.31□□□□□ -2.2
VAPBO95292 USP9YP25-201ENST00000457708 443 ntBASIC1.31□□□□□ -2.2
VAPBO95292 AC005908.1-201ENST00000468701 347 ntBASIC1.31□□□□□ -2.2
VAPBO95292 AP000797.1-201ENST00000478870 387 ntBASIC1.31□□□□□ -2.2
VAPBO95292 AC134050.1-201ENST00000495088 933 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms