Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 MTATP6P15-201ENST00000527233 835 ntBASIC1.61□□□□□ -2.15
NPHP4O75161 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.61□□□□□ -2.15
NPHP4O75161 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.61□□□□□ -2.15
NPHP4O75161 MIR4287-201ENST00000579398 78 ntBASIC1.61□□□□□ -2.15
NPHP4O75161 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.61□□□□□ -2.15
NPHP4O75161 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
NPHP4O75161 AL627230.6-201ENST00000611129 280 ntBASIC1.61□□□□□ -2.15
NPHP4O75161 AC092106.3-201ENST00000611308 722 ntBASIC1.61□□□□□ -2.15
NPHP4O75161 MIR7974-201ENST00000615835 79 ntBASIC1.61□□□□□ -2.15
NPHP4O75161 U4atac.1-201ENST00000618345 95 ntBASIC1.61□□□□□ -2.15
NPHP4O75161 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
NPHP4O75161 RNU6-858P-201ENST00000362436 107 ntBASIC1.6□□□□□ -2.15
NPHP4O75161 RNU1-23P-201ENST00000363361 144 ntBASIC1.6□□□□□ -2.15
NPHP4O75161 SNORA75B-201ENST00000384053 137 ntBASIC1.6□□□□□ -2.15
NPHP4O75161 SNORA40C-201ENST00000391285 128 ntBASIC1.6□□□□□ -2.15
NPHP4O75161 RPS24P7-201ENST00000416921 246 ntBASIC1.6□□□□□ -2.15
NPHP4O75161 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.6□□□□□ -2.15
NPHP4O75161 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.6□□□□□ -2.15
NPHP4O75161 MTND1P32-201ENST00000433043 938 ntBASIC1.6□□□□□ -2.15
NPHP4O75161 GDI2P2-201ENST00000445131 608 ntBASIC1.6□□□□□ -2.15
NPHP4O75161 MTND2P39-201ENST00000457230 764 ntBASIC1.6□□□□□ -2.15
NPHP4O75161 RNU6-953P-201ENST00000459154 107 ntBASIC1.6□□□□□ -2.15
NPHP4O75161 Y_RNA.689-201ENST00000516589 107 ntBASIC1.6□□□□□ -2.15
NPHP4O75161 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.6□□□□□ -2.15
NPHP4O75161 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.6□□□□□ -2.15
NPHP4O75161 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.6□□□□□ -2.15
NPHP4O75161 AL096840.1-201ENST00000603287 93 ntBASIC1.6□□□□□ -2.15
NPHP4O75161 AL365204.3-201ENST00000612448 685 ntBASIC1.6□□□□□ -2.15
NPHP4O75161 AC008133.2-201ENST00000624540 351 ntBASIC1.6□□□□□ -2.15
NPHP4O75161 ZNF702P-202ENST00000434269 1966 ntBASIC1.59□□□□□ -2.15
NPHP4O75161 RNU6-511P-201ENST00000363496 107 ntBASIC1.59□□□□□ -2.15
NPHP4O75161 RNU6-931P-201ENST00000363850 107 ntBASIC1.59□□□□□ -2.15
NPHP4O75161 RNU6-660P-201ENST00000364566 109 ntBASIC1.59□□□□□ -2.15
NPHP4O75161 U3.13-201ENST00000364804 214 ntBASIC1.59□□□□□ -2.15
NPHP4O75161 Y_RNA.302-201ENST00000364997 102 ntBASIC1.59□□□□□ -2.15
NPHP4O75161 RNU5E-6P-201ENST00000365574 115 ntBASIC1.59□□□□□ -2.15
NPHP4O75161 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
NPHP4O75161 U8.14-201ENST00000390843 143 ntBASIC1.59□□□□□ -2.15
NPHP4O75161 RNA5SP465-201ENST00000391195 109 ntBASIC1.59□□□□□ -2.15
NPHP4O75161 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.59□□□□□ -2.15
NPHP4O75161 AC084290.1-201ENST00000434995 374 ntBASIC1.59□□□□□ -2.15
NPHP4O75161 AC004854.1-201ENST00000440356 349 ntBASIC1.59□□□□□ -2.15
NPHP4O75161 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.59□□□□□ -2.15
NPHP4O75161 snoU109.2-201ENST00000459316 135 ntBASIC1.59□□□□□ -2.15
NPHP4O75161 RPL7P43-201ENST00000478876 753 ntBASIC1.59□□□□□ -2.15
NPHP4O75161 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.59□□□□□ -2.15
NPHP4O75161 RNU6-1315P-201ENST00000517187 99 ntBASIC1.59□□□□□ -2.15
NPHP4O75161 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.59□□□□□ -2.15
NPHP4O75161 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.59□□□□□ -2.15
NPHP4O75161 HSPE1P4-201ENST00000550617 308 ntBASIC1.59□□□□□ -2.15
NPHP4O75161 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.59□□□□□ -2.15
NPHP4O75161 AL031274.2-201ENST00000599419 203 ntBASIC1.59□□□□□ -2.15
NPHP4O75161 VN1R107P-201ENST00000601784 209 ntBASIC1.59□□□□□ -2.15
NPHP4O75161 MIR15A-201ENST00000607334 83 ntBASIC1.59□□□□□ -2.15
NPHP4O75161 SDR42E1P4-201ENST00000620894 481 ntBASIC1.59□□□□□ -2.15
NPHP4O75161 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.59□□□□□ -2.15
NPHP4O75161 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.59□□□□□ -2.15
NPHP4O75161 ICE2P2-201ENST00000483823 2787 ntBASIC1.59□□□□□ -2.15
NPHP4O75161 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.59□□□□□ -2.15
NPHP4O75161 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
NPHP4O75161 TEX21P-201ENST00000447107 1476 ntBASIC1.59□□□□□ -2.16
NPHP4O75161 MIR301A-201ENST00000385261 86 ntBASIC1.58□□□□□ -2.16
NPHP4O75161 HMGN2P39-201ENST00000398005 273 ntBASIC1.58□□□□□ -2.16
NPHP4O75161 MIR1302-8-201ENST00000408342 128 ntBASIC1.58□□□□□ -2.16
NPHP4O75161 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.58□□□□□ -2.16
NPHP4O75161 AL353621.1-201ENST00000418219 243 ntBASIC1.58□□□□□ -2.16
NPHP4O75161 EBAG9P1-201ENST00000418955 543 ntBASIC1.58□□□□□ -2.16
NPHP4O75161 RPL7P34-201ENST00000433316 712 ntBASIC1.58□□□□□ -2.16
NPHP4O75161 SNORD97-201ENST00000459187 142 ntBASIC1.58□□□□□ -2.16
NPHP4O75161 AC018868.1-201ENST00000491307 315 ntBASIC1.58□□□□□ -2.16
NPHP4O75161 AC018437.1-201ENST00000492214 406 ntBASIC1.58□□□□□ -2.16
NPHP4O75161 AC020699.1-201ENST00000505161 445 ntBASIC1.58□□□□□ -2.16
NPHP4O75161 AC109927.2-201ENST00000506416 303 ntBASIC1.58□□□□□ -2.16
NPHP4O75161 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.58□□□□□ -2.16
NPHP4O75161 CYP3A137P-201ENST00000562436 69 ntBASIC1.58□□□□□ -2.16
NPHP4O75161 AL391834.2-201ENST00000609982 546 ntBASIC1.58□□□□□ -2.16
NPHP4O75161 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.58□□□□□ -2.16
NPHP4O75161 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
NPHP4O75161 Y_RNA.97-201ENST00000363094 102 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 SNORA25B-201ENST00000365507 128 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 RNU6-946P-201ENST00000383878 107 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 RNU6-1200P-201ENST00000384162 107 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 RNU6-809P-201ENST00000384461 107 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 SSR1P2-201ENST00000415208 787 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 XKRYP1-201ENST00000423438 492 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 AC008267.5-201ENST00000424928 265 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.57□□□□□ -2.16
NPHP4O75161 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.57□□□□□ -2.16
NPHP4O75161 AL591704.1-201ENST00000432574 275 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 XKRYP2-201ENST00000432915 492 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.57□□□□□ -2.16
NPHP4O75161 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.57□□□□□ -2.16
NPHP4O75161 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.57□□□□□ -2.16
NPHP4O75161 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.57□□□□□ -2.16
NPHP4O75161 RNU5B-3P-201ENST00000516601 115 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 RNU6-1092P-201ENST00000516955 87 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 OR5B19P-201ENST00000531766 928 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 AC022880.1-201ENST00000534017 973 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 AL157871.3-201ENST00000557231 293 ntBASIC1.57□□□□□ -2.16
NPHP4O75161 MIR4529-201ENST00000578110 78 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms