Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 RNU6-842P-201ENST00000384269 107 ntBASIC2.83□□□□□ -1.96
LDB3O75112 Y_RNA.480-201ENST00000384364 102 ntBASIC2.83□□□□□ -1.96
LDB3O75112 RNY1P14-201ENST00000384426 108 ntBASIC2.83□□□□□ -1.96
LDB3O75112 RNU6-505P-201ENST00000384427 107 ntBASIC2.83□□□□□ -1.96
LDB3O75112 Y_RNA.527-201ENST00000384573 102 ntBASIC2.83□□□□□ -1.96
LDB3O75112 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.83□□□□□ -1.96
LDB3O75112 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.83□□□□□ -1.96
LDB3O75112 AC236972.1-201ENST00000433225 199 ntBASIC2.83□□□□□ -1.96
LDB3O75112 SNAP23P1-201ENST00000433229 246 ntBASIC2.83□□□□□ -1.96
LDB3O75112 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.83□□□□□ -1.96
LDB3O75112 GSTA11P-201ENST00000452866 669 ntBASIC2.83□□□□□ -1.96
LDB3O75112 RPL12P25-201ENST00000455592 494 ntBASIC2.83□□□□□ -1.96
LDB3O75112 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.83□□□□□ -1.96
LDB3O75112 snoU13.28-201ENST00000459235 104 ntBASIC2.83□□□□□ -1.96
LDB3O75112 RN7SL75P-201ENST00000461926 281 ntBASIC2.83□□□□□ -1.96
LDB3O75112 HMGB1P30-201ENST00000492455 606 ntBASIC2.83□□□□□ -1.96
LDB3O75112 AC022493.1-201ENST00000492984 337 ntBASIC2.83□□□□□ -1.96
LDB3O75112 Y_RNA.661-201ENST00000516003 99 ntBASIC2.83□□□□□ -1.96
LDB3O75112 RNU6-699P-201ENST00000517081 110 ntBASIC2.83□□□□□ -1.96
LDB3O75112 RNU6-988P-201ENST00000519081 107 ntBASIC2.83□□□□□ -1.96
LDB3O75112 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.83□□□□□ -1.96
LDB3O75112 AC104576.1-201ENST00000524225 88 ntBASIC2.83□□□□□ -1.96
LDB3O75112 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LDB3O75112 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.83□□□□□ -1.96
LDB3O75112 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
LDB3O75112 AC011494.1-201ENST00000596454 237 ntBASIC2.83□□□□□ -1.96
LDB3O75112 ELOCP5-201ENST00000604924 333 ntBASIC2.83□□□□□ -1.96
LDB3O75112 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.83□□□□□ -1.96
LDB3O75112 AL132822.1-201ENST00000617063 513 ntBASIC2.83□□□□□ -1.96
LDB3O75112 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.83□□□□□ -1.96
LDB3O75112 7SK.10-201ENST00000621414 298 ntBASIC2.83□□□□□ -1.96
LDB3O75112 AC073308.1-201ENST00000623696 305 ntBASIC2.83□□□□□ -1.96
LDB3O75112 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.83□□□□□ -1.96
LDB3O75112 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.83□□□□□ -1.96
LDB3O75112 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
LDB3O75112 AC093831.2-201ENST00000624393 3427 ntBASIC2.83□□□□□ -1.96
LDB3O75112 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.83□□□□□ -1.96
LDB3O75112 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.83□□□□□ -1.96
LDB3O75112 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.83□□□□□ -1.96
LDB3O75112 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
LDB3O75112 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.82□□□□□ -1.96
LDB3O75112 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LDB3O75112 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.82□□□□□ -1.96
LDB3O75112 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.82□□□□□ -1.96
LDB3O75112 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.82□□□□□ -1.96
LDB3O75112 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.82□□□□□ -1.96
LDB3O75112 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.82□□□□□ -1.96
LDB3O75112 RNU6-799P-201ENST00000363567 107 ntBASIC2.82□□□□□ -1.96
LDB3O75112 RNU6-1032P-201ENST00000384100 107 ntBASIC2.82□□□□□ -1.96
LDB3O75112 SNORA9-201ENST00000384215 133 ntBASIC2.82□□□□□ -1.96
LDB3O75112 RNU6-1179P-201ENST00000384667 107 ntBASIC2.82□□□□□ -1.96
LDB3O75112 MRPL42P3-201ENST00000401492 326 ntBASIC2.82□□□□□ -1.96
LDB3O75112 AL138885.1-201ENST00000405921 675 ntBASIC2.82□□□□□ -1.96
LDB3O75112 RNU6-985P-201ENST00000410182 104 ntBASIC2.82□□□□□ -1.96
LDB3O75112 RNA5SP274-201ENST00000410484 108 ntBASIC2.82□□□□□ -1.96
LDB3O75112 AC099548.1-201ENST00000421443 426 ntBASIC2.82□□□□□ -1.96
LDB3O75112 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.82□□□□□ -1.96
LDB3O75112 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.82□□□□□ -1.96
LDB3O75112 UQCRHP3-201ENST00000451503 251 ntBASIC2.82□□□□□ -1.96
LDB3O75112 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.82□□□□□ -1.96
LDB3O75112 AC092798.1-201ENST00000458542 409 ntBASIC2.82□□□□□ -1.96
LDB3O75112 AC117440.1-201ENST00000474107 571 ntBASIC2.82□□□□□ -1.96
LDB3O75112 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.82□□□□□ -1.96
LDB3O75112 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.82□□□□□ -1.96
LDB3O75112 SCARNA16.2-201ENST00000516520 172 ntBASIC2.82□□□□□ -1.96
LDB3O75112 AC009902.1-201ENST00000519351 183 ntBASIC2.82□□□□□ -1.96
LDB3O75112 AC025755.1-201ENST00000521306 278 ntBASIC2.82□□□□□ -1.96
LDB3O75112 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
LDB3O75112 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.82□□□□□ -1.96
LDB3O75112 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LDB3O75112 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.82□□□□□ -1.96
LDB3O75112 TRAV37-201ENST00000553906 342 ntBASIC2.82□□□□□ -1.96
LDB3O75112 AL117187.1-201ENST00000555482 181 ntBASIC2.82□□□□□ -1.96
LDB3O75112 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.82□□□□□ -1.96
LDB3O75112 MIR3200-201ENST00000580767 85 ntBASIC2.82□□□□□ -1.96
LDB3O75112 BNIP3P16-201ENST00000589779 534 ntBASIC2.82□□□□□ -1.96
LDB3O75112 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.82□□□□□ -1.96
LDB3O75112 NUTF2P8-201ENST00000604593 363 ntBASIC2.82□□□□□ -1.96
LDB3O75112 AL161423.1-201ENST00000613700 262 ntBASIC2.82□□□□□ -1.96
LDB3O75112 AC083806.3-201ENST00000614016 455 ntBASIC2.82□□□□□ -1.96
LDB3O75112 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.82□□□□□ -1.96
LDB3O75112 AC091564.4-201ENST00000533934 2194 ntBASIC2.82□□□□□ -1.96
LDB3O75112 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.81□□□□□ -1.96
LDB3O75112 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.81□□□□□ -1.96
LDB3O75112 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.81□□□□□ -1.96
LDB3O75112 MIR412-201ENST00000362142 91 ntBASIC2.81□□□□□ -1.96
LDB3O75112 SNORD3E-201ENST00000362899 217 ntBASIC2.81□□□□□ -1.96
LDB3O75112 Y_RNA.80-201ENST00000362996 102 ntBASIC2.81□□□□□ -1.96
LDB3O75112 Y_RNA.151-201ENST00000363566 112 ntBASIC2.81□□□□□ -1.96
LDB3O75112 Y_RNA.485-201ENST00000384395 102 ntBASIC2.81□□□□□ -1.96
LDB3O75112 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
LDB3O75112 Y_RNA.645-201ENST00000391229 102 ntBASIC2.81□□□□□ -1.96
LDB3O75112 SNORA75.6-201ENST00000391318 127 ntBASIC2.81□□□□□ -1.96
LDB3O75112 SNORA48.8-201ENST00000391324 134 ntBASIC2.81□□□□□ -1.96
LDB3O75112 RNU2-3P-201ENST00000410144 191 ntBASIC2.81□□□□□ -1.96
LDB3O75112 RNU6-607P-201ENST00000411283 108 ntBASIC2.81□□□□□ -1.96
LDB3O75112 HMGB3P2-201ENST00000411913 584 ntBASIC2.81□□□□□ -1.96
LDB3O75112 CYCSP33-201ENST00000414485 327 ntBASIC2.81□□□□□ -1.96
LDB3O75112 AL353621.1-201ENST00000418219 243 ntBASIC2.81□□□□□ -1.96
LDB3O75112 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms