Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 RPS29P2-201ENST00000479278 136 ntBASIC3.44□□□□□ -1.86
PRPF3O43395 AC018437.1-201ENST00000492214 406 ntBASIC3.44□□□□□ -1.86
PRPF3O43395 AC097462.2-201ENST00000504623 481 ntBASIC3.44□□□□□ -1.86
PRPF3O43395 AC103851.1-201ENST00000506833 274 ntBASIC3.44□□□□□ -1.86
PRPF3O43395 AK3P2-201ENST00000507976 429 ntBASIC3.44□□□□□ -1.86
PRPF3O43395 AC008526.1-201ENST00000509149 338 ntBASIC3.44□□□□□ -1.86
PRPF3O43395 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.44□□□□□ -1.86
PRPF3O43395 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.44□□□□□ -1.86
PRPF3O43395 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.44□□□□□ -1.86
PRPF3O43395 RPL39P5-202ENST00000512505 151 ntBASIC3.44□□□□□ -1.86
PRPF3O43395 RN7SKP272-201ENST00000516988 232 ntBASIC3.44□□□□□ -1.86
PRPF3O43395 AC009812.2-201ENST00000517657 457 ntBASIC3.44□□□□□ -1.86
PRPF3O43395 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.44□□□□□ -1.86
PRPF3O43395 AP002404.1-201ENST00000532005 451 ntBASIC3.44□□□□□ -1.86
PRPF3O43395 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.44□□□□□ -1.86
PRPF3O43395 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.44□□□□□ -1.86
PRPF3O43395 MIR3672-201ENST00000584290 82 ntBASIC3.44□□□□□ -1.86
PRPF3O43395 LARP7P1-201ENST00000605576 316 ntBASIC3.44□□□□□ -1.86
PRPF3O43395 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.44□□□□□ -1.86
PRPF3O43395 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PRPF3O43395 SCARNA15.3-201ENST00000626315 122 ntBASIC3.44□□□□□ -1.86
PRPF3O43395 SCARNA4.1-201ENST00000628597 123 ntBASIC3.44□□□□□ -1.86
PRPF3O43395 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.43□□□□□ -1.86
PRPF3O43395 AL359854.1-201ENST00000614203 1594 ntBASIC3.43□□□□□ -1.86
PRPF3O43395 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
PRPF3O43395 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PRPF3O43395 Y_RNA.301-201ENST00000364990 103 ntBASIC3.43□□□□□ -1.86
PRPF3O43395 DYNLT3P1-201ENST00000378574 347 ntBASIC3.43□□□□□ -1.86
PRPF3O43395 AL356432.1-201ENST00000405809 419 ntBASIC3.43□□□□□ -1.86
PRPF3O43395 MICF-203ENST00000432679 129 ntBASIC3.43□□□□□ -1.86
PRPF3O43395 MRPL50P4-201ENST00000446432 475 ntBASIC3.43□□□□□ -1.86
PRPF3O43395 RNA5SP341-201ENST00000516261 117 ntBASIC3.43□□□□□ -1.86
PRPF3O43395 RNU6-566P-201ENST00000516790 107 ntBASIC3.43□□□□□ -1.86
PRPF3O43395 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.43□□□□□ -1.86
PRPF3O43395 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.43□□□□□ -1.86
PRPF3O43395 MIR4325-201ENST00000583049 90 ntBASIC3.43□□□□□ -1.86
PRPF3O43395 MIR3616-201ENST00000584070 92 ntBASIC3.43□□□□□ -1.86
PRPF3O43395 MIR4298-201ENST00000584380 73 ntBASIC3.43□□□□□ -1.86
PRPF3O43395 AC005046.1-201ENST00000608515 625 ntBASIC3.43□□□□□ -1.86
PRPF3O43395 AC007792.1-201ENST00000623023 402 ntBASIC3.43□□□□□ -1.86
PRPF3O43395 MIR7157-201ENST00000635801 60 ntBASIC3.43□□□□□ -1.86
PRPF3O43395 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.43□□□□□ -1.86
PRPF3O43395 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.43□□□□□ -1.86
PRPF3O43395 AL109809.4-201ENST00000603520 2185 ntBASIC3.43□□□□□ -1.86
PRPF3O43395 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PRPF3O43395 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PRPF3O43395 RNU6-1010P-201ENST00000362757 107 ntBASIC3.42□□□□□ -1.86
PRPF3O43395 SNORA68.1-201ENST00000364537 132 ntBASIC3.42□□□□□ -1.86
PRPF3O43395 Y_RNA.263-201ENST00000364659 114 ntBASIC3.42□□□□□ -1.86
PRPF3O43395 RNU6-593P-201ENST00000364716 112 ntBASIC3.42□□□□□ -1.86
PRPF3O43395 RNU6-827P-201ENST00000365553 106 ntBASIC3.42□□□□□ -1.86
PRPF3O43395 AL138885.1-201ENST00000405921 675 ntBASIC3.42□□□□□ -1.86
PRPF3O43395 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.42□□□□□ -1.86
PRPF3O43395 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.42□□□□□ -1.86
PRPF3O43395 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.42□□□□□ -1.86
PRPF3O43395 S100A11P2-201ENST00000467589 312 ntBASIC3.42□□□□□ -1.86
PRPF3O43395 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.42□□□□□ -1.86
PRPF3O43395 RNA5SP112-201ENST00000515937 99 ntBASIC3.42□□□□□ -1.86
PRPF3O43395 RNU6-1088P-201ENST00000516850 104 ntBASIC3.42□□□□□ -1.86
PRPF3O43395 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.42□□□□□ -1.86
PRPF3O43395 AC105137.2-201ENST00000569073 466 ntBASIC3.42□□□□□ -1.86
PRPF3O43395 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.42□□□□□ -1.86
PRPF3O43395 MIR4506-201ENST00000584693 77 ntBASIC3.42□□□□□ -1.86
PRPF3O43395 AC010620.2-201ENST00000600135 313 ntBASIC3.42□□□□□ -1.86
PRPF3O43395 AC243960.4-201ENST00000600532 288 ntBASIC3.42□□□□□ -1.86
PRPF3O43395 AL133216.2-202ENST00000634512 349 ntBASIC3.42□□□□□ -1.86
PRPF3O43395 TPTEP1-208ENST00000636884 213 ntBASIC3.42□□□□□ -1.86
PRPF3O43395 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
PRPF3O43395 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.42□□□□□ -1.86
PRPF3O43395 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
PRPF3O43395 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PRPF3O43395 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.41□□□□□ -1.86
PRPF3O43395 Y_RNA.184-201ENST00000363884 108 ntBASIC3.41□□□□□ -1.86
PRPF3O43395 RNU6-933P-201ENST00000384424 107 ntBASIC3.41□□□□□ -1.86
PRPF3O43395 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.41□□□□□ -1.86
PRPF3O43395 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.41□□□□□ -1.86
PRPF3O43395 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.41□□□□□ -1.86
PRPF3O43395 MTND1P11-201ENST00000456661 876 ntBASIC3.41□□□□□ -1.86
PRPF3O43395 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.41□□□□□ -1.86
PRPF3O43395 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
PRPF3O43395 MRPS36P2-201ENST00000512569 299 ntBASIC3.41□□□□□ -1.86
PRPF3O43395 SNORA31.23-201ENST00000517219 133 ntBASIC3.41□□□□□ -1.86
PRPF3O43395 RNA5SP454-201ENST00000517231 127 ntBASIC3.41□□□□□ -1.86
PRPF3O43395 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.41□□□□□ -1.86
PRPF3O43395 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.41□□□□□ -1.86
PRPF3O43395 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.41□□□□□ -1.86
PRPF3O43395 AC138761.3-201ENST00000579993 334 ntBASIC3.41□□□□□ -1.86
PRPF3O43395 uc_338.15-201ENST00000615470 191 ntBASIC3.41□□□□□ -1.86
PRPF3O43395 AC099654.5-201ENST00000636479 350 ntBASIC3.41□□□□□ -1.86
PRPF3O43395 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PRPF3O43395 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PRPF3O43395 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.4□□□□□ -1.86
PRPF3O43395 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PRPF3O43395 SNORD114-19-201ENST00000363072 75 ntBASIC3.4□□□□□ -1.87
PRPF3O43395 RNU6-486P-201ENST00000363116 107 ntBASIC3.4□□□□□ -1.87
PRPF3O43395 RNU6-622P-201ENST00000384272 103 ntBASIC3.4□□□□□ -1.87
PRPF3O43395 SNORD73A-201ENST00000386062 65 ntBASIC3.4□□□□□ -1.87
PRPF3O43395 RN7SKP123-201ENST00000410732 291 ntBASIC3.4□□□□□ -1.87
PRPF3O43395 RNU2-41P-201ENST00000410991 178 ntBASIC3.4□□□□□ -1.87
PRPF3O43395 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms