Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LARP7P3-201ENST00000579888 337 ntBASIC4.29□□□□□ -1.72
SOX1O00570 MIR3936-201ENST00000584304 110 ntBASIC4.29□□□□□ -1.72
SOX1O00570 AC091178.1-203ENST00000584586 279 ntBASIC4.29□□□□□ -1.72
SOX1O00570 AC091167.4-201ENST00000605079 184 ntBASIC4.29□□□□□ -1.72
SOX1O00570 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.29□□□□□ -1.72
SOX1O00570 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.29□□□□□ -1.72
SOX1O00570 AC126323.6-202ENST00000568092 3511 ntBASIC4.29□□□□□ -1.72
SOX1O00570 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SOX1O00570 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.29□□□□□ -1.72
SOX1O00570 AL133383.2-201ENST00000622958 2336 ntBASIC4.29□□□□□ -1.72
SOX1O00570 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.29□□□□□ -1.72
SOX1O00570 AC000123.3-201ENST00000624029 4975 ntBASIC4.29□□□□□ -1.72
SOX1O00570 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.29□□□□□ -1.72
SOX1O00570 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SOX1O00570 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.29□□□□□ -1.72
SOX1O00570 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SOX1O00570 SCN1A-220ENST00000641603 12506 ntBASIC4.28□□□□□ -1.72
SOX1O00570 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SOX1O00570 RNU5B-2P-201ENST00000363036 113 ntBASIC4.28□□□□□ -1.72
SOX1O00570 Y_RNA.304-201ENST00000365011 112 ntBASIC4.28□□□□□ -1.72
SOX1O00570 Y_RNA.319-201ENST00000365138 92 ntBASIC4.28□□□□□ -1.72
SOX1O00570 Z98749.2-208ENST00000381646 500 ntBASIC4.28□□□□□ -1.72
SOX1O00570 U1.1-201ENST00000384101 164 ntBASIC4.28□□□□□ -1.72
SOX1O00570 RNU6-20P-201ENST00000384106 107 ntBASIC4.28□□□□□ -1.72
SOX1O00570 Y_RNA.570-201ENST00000384750 101 ntBASIC4.28□□□□□ -1.72
SOX1O00570 MIR10B-201ENST00000385011 110 ntBASIC4.28□□□□□ -1.72
SOX1O00570 MIR518D-201ENST00000385014 87 ntBASIC4.28□□□□□ -1.72
SOX1O00570 AL592291.1-201ENST00000403830 352 ntBASIC4.28□□□□□ -1.72
SOX1O00570 MTHFD2P2-201ENST00000407725 247 ntBASIC4.28□□□□□ -1.72
SOX1O00570 MIR1251-201ENST00000408552 70 ntBASIC4.28□□□□□ -1.72
SOX1O00570 RNU6-394P-201ENST00000410735 107 ntBASIC4.28□□□□□ -1.72
SOX1O00570 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.28□□□□□ -1.72
SOX1O00570 AC005300.1-201ENST00000428401 373 ntBASIC4.28□□□□□ -1.72
SOX1O00570 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.28□□□□□ -1.72
SOX1O00570 AC007395.1-201ENST00000451333 677 ntBASIC4.28□□□□□ -1.72
SOX1O00570 AP001324.2-201ENST00000461163 319 ntBASIC4.28□□□□□ -1.72
SOX1O00570 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.28□□□□□ -1.72
SOX1O00570 AC091959.1-201ENST00000495857 238 ntBASIC4.28□□□□□ -1.72
SOX1O00570 BTF3L4P4-201ENST00000506381 449 ntBASIC4.28□□□□□ -1.72
SOX1O00570 RNU6-567P-201ENST00000516746 107 ntBASIC4.28□□□□□ -1.72
SOX1O00570 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.28□□□□□ -1.72
SOX1O00570 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.28□□□□□ -1.72
SOX1O00570 MIR3144-201ENST00000579460 79 ntBASIC4.28□□□□□ -1.72
SOX1O00570 AC007546.2-201ENST00000623996 360 ntBASIC4.28□□□□□ -1.72
SOX1O00570 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SOX1O00570 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SOX1O00570 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SOX1O00570 AC008725.1-201ENST00000605123 2263 ntBASIC4.28□□□□□ -1.72
SOX1O00570 Z73965.1-201ENST00000623412 2297 ntBASIC4.28□□□□□ -1.72
SOX1O00570 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.27□□□□□ -1.73
SOX1O00570 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SOX1O00570 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SOX1O00570 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.27□□□□□ -1.73
SOX1O00570 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SOX1O00570 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.27□□□□□ -1.73
SOX1O00570 AL365361.1-201ENST00000566942 3481 ntBASIC4.27□□□□□ -1.73
SOX1O00570 Y_RNA.136-201ENST00000363444 102 ntBASIC4.27□□□□□ -1.73
SOX1O00570 RNA5SP50-201ENST00000363731 107 ntBASIC4.27□□□□□ -1.73
SOX1O00570 SNORA38.1-201ENST00000364172 131 ntBASIC4.27□□□□□ -1.73
SOX1O00570 Y_RNA.383-201ENST00000383855 97 ntBASIC4.27□□□□□ -1.73
SOX1O00570 RNU6-1145P-201ENST00000384246 107 ntBASIC4.27□□□□□ -1.73
SOX1O00570 SNORA46.1-201ENST00000391069 153 ntBASIC4.27□□□□□ -1.73
SOX1O00570 SNORA74C-2-201ENST00000411179 201 ntBASIC4.27□□□□□ -1.73
SOX1O00570 RPL23AP95-201ENST00000426806 265 ntBASIC4.27□□□□□ -1.73
SOX1O00570 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.27□□□□□ -1.73
SOX1O00570 RPL23AP14-201ENST00000468281 468 ntBASIC4.27□□□□□ -1.73
SOX1O00570 AP001025.1-201ENST00000486139 332 ntBASIC4.27□□□□□ -1.73
SOX1O00570 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.27□□□□□ -1.73
SOX1O00570 AC091874.1-201ENST00000511402 339 ntBASIC4.27□□□□□ -1.73
SOX1O00570 YPEL5P3-201ENST00000547227 352 ntBASIC4.27□□□□□ -1.73
SOX1O00570 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.27□□□□□ -1.73
SOX1O00570 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX1O00570 AL078605.1-201ENST00000603529 500 ntBASIC4.27□□□□□ -1.73
SOX1O00570 AL137849.1-201ENST00000604767 169 ntBASIC4.27□□□□□ -1.73
SOX1O00570 AL138963.2-201ENST00000605137 226 ntBASIC4.27□□□□□ -1.73
SOX1O00570 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.27□□□□□ -1.73
SOX1O00570 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SOX1O00570 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SOX1O00570 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SOX1O00570 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SOX1O00570 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SOX1O00570 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SOX1O00570 AC087190.4-201ENST00000574616 8334 ntBASIC4.27□□□□□ -1.73
SOX1O00570 MAPK10-303ENST00000641324 3959 ntBASIC4.26□□□□□ -1.73
SOX1O00570 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SOX1O00570 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SOX1O00570 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SOX1O00570 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SOX1O00570 SNORA60-201ENST00000362396 134 ntBASIC4.26□□□□□ -1.73
SOX1O00570 SNORD32A-201ENST00000364805 84 ntBASIC4.26□□□□□ -1.73
SOX1O00570 RNU6-81P-201ENST00000365608 104 ntBASIC4.26□□□□□ -1.73
SOX1O00570 Y_RNA.418-201ENST00000384029 102 ntBASIC4.26□□□□□ -1.73
SOX1O00570 Y_RNA.446-201ENST00000384178 104 ntBASIC4.26□□□□□ -1.73
SOX1O00570 RNU6-1289P-201ENST00000384431 106 ntBASIC4.26□□□□□ -1.73
SOX1O00570 MIR329-1-201ENST00000385028 80 ntBASIC4.26□□□□□ -1.73
SOX1O00570 RNU6-159P-201ENST00000391080 106 ntBASIC4.26□□□□□ -1.73
SOX1O00570 RPL23AP36-201ENST00000413895 458 ntBASIC4.26□□□□□ -1.73
SOX1O00570 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.26□□□□□ -1.73
SOX1O00570 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX1O00570 RNA5SP103-201ENST00000459503 118 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms